Evidence map›Paper›PMID 28499458›Full record

ArticleParasites & vectors2017

Evaluation of a Multilocus Sequence Typing (MLST) scheme for Leishmania (Viannia) braziliensis and Leishmania (Viannia) panamensis in Colombia.

Giovanny Herrera, Carolina Hernández, Martha S Ayala, Carolina Flórez, Aníbal A Teherán, Juan David Ramírez

Open access · goldAbstract readEvaluation Study
In one paragraph

Article in Parasites & vectors, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Article
  3. Rapid detection, quantification and speciation ofbioRxiv : the preprint server for biology · 2024
    Article
  4. Article
  5. Genetic Diversity and Population Structure ofPathogens (Basel, Switzerland) · 2023
    Article
  6. Insights into the Genetic Diversity ofPathogens (Basel, Switzerland) · 2023
    Article
  7. Article
  8. Article
  9. Review
  10. Characterization ofTropical medicine and infectious disease · 2022
    Article
  11. Article
  12. Spatial and Temporal Variability of Visceral Leishmaniasis in Colombia, 2007 to 2018.The American journal of tropical medicine and hygiene · 2021
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Genomic Diversification, Structural Plasticity, and Hybridization inFrontiers in cellular and infection microbiology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Giovanny HerreraGrupo de Investigaciones Microbiológicas-UR (GIMUR), Programa de Biología, Facultad de Ciencias Naturales y Matemáticas, Universidad del Rosario, Carrera 24 No. 63C-69, Bogotá, Colombia.
Carolina HernándezGrupo de Investigaciones Microbiológicas-UR (GIMUR), Programa de Biología, Facultad de Ciencias Naturales y Matemáticas, Universidad del Rosario, Carrera 24 No. 63C-69, Bogotá, Colombia.
Martha S AyalaGrupo de Parasitología, Instituto Nacional de Salud, Avenida Calle 26 #51-20, Bogotá, Colombia.
Carolina FlórezGrupo de Parasitología, Instituto Nacional de Salud, Avenida Calle 26 #51-20, Bogotá, Colombia.
Aníbal A TeheránResidente Medicina de Emergencias, Escuela de Medicina y Ciencias de la Salud, Universidad del Rosario, Carrera 24 No. 63C-69, Bogotá, Colombia.
Juan David RamírezGrupo de Investigaciones Microbiológicas-UR (GIMUR), Programa de Biología, Facultad de Ciencias Naturales y Matemáticas, Universidad del Rosario, Carrera 24 No. 63C-69, Bogotá, Colombia. juand.ramirez@urosario.edu.co.
Universidad del Rosario · COInstituto Nacional de Salud · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLeishmaniases are parasitic vector-borne diseases affecting more than 12 million people in 98 countries. In Colombia, leishmaniasis is widespread and the most common clinical manifestation is cutaneous, mainly caused by L. panamensis and L. braziliensis. Currently, the genetic diversity of these species in Colombia is unknown. To address this, we applied molecular techniques for their characterization, using multilocus sequence typing (MLST) to explore the genetic variability and phylodynamics of the disease.

methodsSeven previously described genetic markers were selected highlighting the implementation of a mitochondrial marker. Markers were applied to 163 samples from isolates obtained between 1980 and 2001.

resultsThe identification of the samples showed an excellent correlation with typing tests previously applied (MLEE, monoclonal antibodies). Isolates of L. braziliensis showed greater genetic diversity than L. panamensis, and a greater number of diploid sequence types (DSTs). In addition, the geographical distribution of DSTs for each species were obtained through georeferencing maps.

conclusionsTo our knowldge, this study represents the first description of the genetic variability of L. panamensis in Colombia and South America, and is the first to propose a scheme of MLST for epidemiological surveillance of leishmaniasis in the country.

Indexed as

Genetic VariationAnimalsColombiaDNA, ProtozoanGenetic MarkersHumansLeishmania braziliensisLeishmania guyanensisLeishmaniasis, CutaneousMultilocus Sequence TypingPhylogenySouth AmericaDNA, ProtozoanGenetic MarkersCutaneous leishmaniasisDSTGenetic diversityLeishmaniaMLST

Identifiers

PMID28499458
PMCPMC5429539
OpenAlexW2612178877

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.