Evidence map›Paper›PMID 28499390›Full record

ArticleBMC genetics2017

High-content behavioral profiling reveals neuronal genetic network modulating Drosophila larval locomotor program.

Boanerges Aleman-Meza, Mario Loeza-Cabrera, Omar Peña-Ramos, Michael Stern, Weiwei Zhong

Open access · diamondAbstract read
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Article in BMC genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Boanerges Aleman-MezaDepartment of BioSciences, Rice University, Houston, TX, 77005, USA.
Mario Loeza-CabreraDepartment of BioSciences, Rice University, Houston, TX, 77005, USA.
Omar Peña-RamosDepartment of BioSciences, Rice University, Houston, TX, 77005, USA.
Michael SternDepartment of BioSciences, Rice University, Houston, TX, 77005, USA.
Weiwei ZhongDepartment of BioSciences, Rice University, Houston, TX, 77005, USA. weiwei.zhong@rice.edu.ORCID 0000-0003-2223-6121
Rice University · US

Funding

Machine Vision Analysis of C. Elegans Phenotypic PatternsR01DA018341 · NIDA · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI SCHAFER, WILLIAM R, STERNBERG, PAUL WARREN · 2005 to 2014
$3.4M
Quantitiative Genetic Interaction Mapping of Disease Genes in C elegansR00HG004724 · NHGRI · RICE UNIVERSITY · PI ZHONG, WEIWEI · 2009 to 2011
$747k
Quantitiative Genetic Interaction Mapping of Disease Genes in C elegansK99HG004724 · NHGRI · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ZHONG, WEIWEI · 2008 to 2008
$89k
NHGRI NIH HHS K99 HG004724NHGRI NIH HHS R00 HG004724NIDA NIH HHS R01 DA018341
6 · The paper itself

Abstract

backgroundTwo key questions in understanding the genetic control of behaviors are: what genes are involved and how these genes interact. To answer these questions at a systems level, we conducted high-content profiling of Drosophila larval locomotor behaviors for over 100 genotypes.

resultsWe studied 69 genes whose C. elegans orthologs were neuronal signalling genes with significant locomotor phenotypes, and conducted RNAi with ubiquitous, pan-neuronal, or motor-neuronal Gal4 drivers. Inactivation of 42 genes, including the nicotinic acetylcholine receptors nAChRα1 and nAChRα3, in the neurons caused significant movement defects. Bioinformatic analysis suggested 81 interactions among these genes based on phenotypic pattern similarities. Comparing the worm and fly data sets, we found that these genes were highly conserved in having neuronal expressions and locomotor phenotypes. However, the genetic interactions were not conserved for ubiquitous profiles, and may be mildly conserved for the neuronal profiles. Unexpectedly, our data also revealed a possible motor-neuronal control of body size, because inactivation of Rdl and Gαo in the motor neurons reduced the larval body size. Overall, these data established a framework for further exploring the genetic control of Drosophila larval locomotion.

conclusionsHigh content, quantitative phenotyping of larval locomotor behaviours provides a framework for system-level understanding of the gene networks underlying such behaviours.

Indexed as

Gene Regulatory NetworksAnimalsBehavior, AnimalDrosophila melanogasterDrosophila ProteinsEpistasis, GeneticFemaleGene Expression ProfilingGene Expression Regulation, DevelopmentalLarvaLocomotionMaleNeuronsRNA InterferenceSignal TransductionDrosophila ProteinsBehaviourDrosophila melanogasterGenetic interaction networkHigh-content phenotypic profilingLarval locomotion

Identifiers

PMID28499390
PMCPMC5429570
OpenAlexW2614057691

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.