Evidence map›Paper›PMID 28499068›Full record

ArticlePlant biotechnology journal2018

MutMapPlus identified novel mutant alleles of a rice starch branching enzyme IIb gene for fine-tuning of cooked rice texture.

Masaru Nakata, Tomomi Miyashita, Rieko Kimura, Yuriko Nakata, Hiroki Takagi, Masaharu Kuroda, Takeshi Yamaguchi, Takayuki Umemoto, Hiromoto Yamakawa

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 56 citations in OpenAlex.

  1. Advances in mutant characterization for detecting causal mutations in crop plants.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
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  8. Fine Mapping of Stripe-Rust-Resistance GenePlants (Basel, Switzerland) · 2022
    Article
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  11. Allelic Diversification of theInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Masaru NakataDivision of Crop Development, Central Region Agricultural Research Center, National Agriculture and Food Research Organization (NARO), Joetsu, Japan.
Tomomi MiyashitaDivision of Crop Development, Central Region Agricultural Research Center, National Agriculture and Food Research Organization (NARO), Joetsu, Japan.
Rieko KimuraDivision of Crop Development, Central Region Agricultural Research Center, National Agriculture and Food Research Organization (NARO), Joetsu, Japan.
Yuriko NakataDivision of Crop Development, Central Region Agricultural Research Center, National Agriculture and Food Research Organization (NARO), Joetsu, Japan.
Hiroki TakagiDepartment of Bioproduction Science, Ishikawa Prefectural University, Nonoichi, Japan.
Masaharu KurodaDivision of Crop Development, Central Region Agricultural Research Center, National Agriculture and Food Research Organization (NARO), Joetsu, Japan.
Takeshi YamaguchiDivision of Crop Development, Central Region Agricultural Research Center, National Agriculture and Food Research Organization (NARO), Joetsu, Japan.
Takayuki UmemotoInstitute of Crop Science, National Agriculture and Food Research Organization (NARO), Tsukuba, Japan.
Hiromoto YamakawaDivision of Crop Development, Central Region Agricultural Research Center, National Agriculture and Food Research Organization (NARO), Joetsu, Japan.
National Agriculture and Food Research Organization · JPCentral Region Agricultural Research Center · JPInstitute of Crop Science · JPIshikawa Prefectural University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Physicochemical properties of storage starch largely determine rice grain quality and food characteristics. Therefore, modification of starch property is effective to fine-tune cooked rice textures. To obtain new resources with modified starch property as breeding materials, we screened a mutant population of a japonica cultivar Nipponbare and found two independent mutant lines, altered gelatinization (age)1 and age2, with moderate changes in starch gelatinization property. A combination of conventional genetic analyses and the latest mapping method, MutMapPlus, revealed that both of these lines harbour novel independent mutant alleles of starch branching enzyme IIb (BEIIb) gene. In age1, amino acid substitution of Met-723 to Lys completely abolished BEIIb enzyme activity without significant reduction in its protein level. A transposon insertion in an intron of BEIIb gene reduced BEIIb protein level and activity in age2. Production of a series of the mutant lines by combining age alleles and indica-type starch synthase IIa allele established stepwise alteration of the physicochemical properties of starch including apparent amylose content, thermal property, digestibility by α-amylase and branched structures of amylopectin. Consistent with the alteration of starch properties, the results of a sensory evaluation test demonstrated that warm cooked rice of the mutants showed a variety of textures without marked reduction in overall palatability. These results suggest that a series of the mutant lines are capable of manipulation of cooked rice textures.

Indexed as

1,4-alpha-Glucan Branching EnzymeAllelesAmylopectinOryza1,4-alpha-Glucan Branching EnzymeAmylopectinstarch-branching enzyme IIbamylopectincooked rice texturemutant alleleMutMapPlusOryza sativastarch branching enzyme

Identifiers

PMID28499068
PMCPMC5785365
OpenAlexW2612183024

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.