Evidence map›Paper›PMID 28498984›Full record

ArticleJournal of experimental botany2017

Inheritance of vernalization memory at FLOWERING LOCUS C during plant regeneration.

Miyuki Nakamura, Lars Hennig

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Journal of genetics · 2021
    Article
  4. A tribute to Lars Hennig (1970-2018).Journal of experimental botany · 2018
    Article
  5. JXB at SEB Florence 2018.Journal of experimental botany · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Miyuki NakamuraDepartment of Plant Biology and Linnean Center for Plant Biology, Swedish University of Agricultural Sciences,PO Box 7080, SE-75007 Uppsala, Sweden.
Lars HennigDepartment of Plant Biology and Linnean Center for Plant Biology, Swedish University of Agricultural Sciences,PO Box 7080, SE-75007 Uppsala, Sweden.
Swedish University of Agricultural Sciences · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Specific gene states can be transmitted to subsequent cell generations through mitosis involving particular chromatin (epigenetic) states. During reproduction of plants and animals, however, most epigenetic states are reset to allow development to start anew. Flowering is one of the critical developmental steps by which plants acquire their reproductive capacity. This phase transition is controlled by environmental signals and autonomous regulation. The FLOWERING LOCUS C (FLC) gene is a flowering repressor that is epigenetically silenced after long-term exposure to cold, ensuring flowering in the spring season. In Arabidopsis thaliana, epigenetically silenced FLC expression is reset during sexual reproduction. Plants have a remarkable potential to regenerate from somatic cells. However, little is known about whether the regeneration process is similar to sexual reproduction in terms of affecting chromatin states. Here, we tested whether FLC silencing is reset during in vitro regeneration. Transcriptional repression and high H3K27me3 at FLC were both stably transmitted, resulting in early flowering in regenerated shoots. Thus, the silenced epigenetic state of FLC is reset only during sexual reproduction and not during in vitro regeneration. In contrast, the active epigenetic state of FLC was only partially maintained through in vitro reproduction, suggesting that regeneration causes stochastic FLC silencing.

Indexed as

ArabidopsisArabidopsis ProteinsEpigenesis, GeneticFlowersGene SilencingHistonesInheritance PatternsLysineMADS Domain ProteinsPlant ShootsRegenerationArabidopsis ProteinsAt5g10140 protein, ArabidopsisHistonesLysineMADS Domain ProteinsArabidopsis thalianachromatindevelopmentepigenetic inheritancephase transitionshoot regeneration

Identifiers

PMID28498984
PMCPMC5853441
OpenAlexW2613599627

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.