Evidence map›Paper›PMID 28494962›Full record

ArticleBiophysical journal2017

Nuclear Positioning and Its Translational Dynamics Are Regulated by Cell Geometry.

A V Radhakrishnan, Doorgesh S Jokhun, Saradha Venkatachalapathy, G V Shivashankar

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

  1. The 3D Genome: From Structure to Function.International journal of molecular sciences · 2021
    Review
  2. A spatial model of YAP/TAZ signaling reveals how stiffness, dimensionality, and shape contribute to emergent outcomes.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 2 countries.

A V RadhakrishnanMechanobiology Institute, National University of Singapore, Singapore.
Doorgesh S JokhunMechanobiology Institute, National University of Singapore, Singapore.
Saradha VenkatachalapathyMechanobiology Institute, National University of Singapore, Singapore.
G V ShivashankarMechanobiology Institute, National University of Singapore, Singapore; Department of Biological Sciences, National University of Singapore, Singapore; Institute of Molecular Oncology, Italian Foundation for Cancer Research, Milan, Italy. Electronic address: shiva.gvs@gmail.com.
National University of Singapore · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The collective activity of several molecular motors and other active processes generate large forces for directional motion within the cell, which is vital for a multitude of cellular functions such as migration, division, contraction, transport, and positioning of various organelles. These processes also generate a background of fluctuating forces, which influence intracellular dynamics and thereby create unique biophysical signatures, which are altered in many diseases. In this study, we have used the nucleus as a probe particle to understand the microrheological properties of altered intracellular environments by using micropatterning to confine cells in two structurally and functionally extreme geometries. We find that nuclear positional dynamics is sensitive to the cytoskeletal organization by studying the effect of actin polymerization and nuclear rigidity on the diffusive behavior of the nucleus. Taken together, our results suggest that mapping nuclear positional dynamics provides important insights into biophysical properties of the active cytoplasmic medium. These biophysical signatures have the potential to be used as an ultrasensitive single-cell assay for early disease diagnostics.

Indexed as

ActinsAnimalsCarbocyaninesCell NucleusCell ShapeComputer SimulationCulture MediaCytoplasmCytoskeletonDiffusionFibronectinsFluorescent DyesMiceMicroscopy, ConfocalModels, BiologicalNIH 3T3 CellsActinsAlexa Fluor 647CarbocyaninesCulture MediaFibronectinsFluorescent Dyes

Identifiers

PMID28494962
PMCPMC5425384
OpenAlexW2613940971

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.