Evidence map›Paper›PMID 28494955›Full record

ArticleBiophysical journal2017

Environmental Calcium Controls Alternate Physical States of the Caulobacter Surface Layer.

Jonathan Herrmann, Fatemeh Jabbarpour, Paul G Bargar, John F Nomellini, Po-Nan Li, Thomas J Lane, Thomas M Weiss, John Smit, Lucy Shapiro, Soichi Wakatsuki

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Physical properties of the bacterial outer membrane.Nature reviews. Microbiology · 2022
    Review
  7. Article
  8. Article
  9. A bacterial surface layer protein exploits multistep crystallization for rapid self-assembly.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Jonathan HerrmannDepartment of Structural Biology, Stanford University, Stanford, California; Bioscience Division, SLAC National Accelerator Laboratory, Menlo Park, California. Electronic address: jherrma2@stanford.edu.
Fatemeh JabbarpourDepartment of Structural Biology, Stanford University, Stanford, California.
Paul G BargarMenlo-Atherton High School, Atherton, California.
John F NomelliniDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia, Canada.
Po-Nan LiDepartment of Electrical Engineering, Stanford University, Stanford, California.
Thomas J LaneBioscience Division, SLAC National Accelerator Laboratory, Menlo Park, California.
Thomas M WeissBioscience Division, SLAC National Accelerator Laboratory, Menlo Park, California.
John SmitDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia, Canada.
Lucy ShapiroDepartment of Developmental Biology, Stanford University, Stanford, California. Electronic address: shapiro@stanford.edu.
Soichi WakatsukiDepartment of Structural Biology, Stanford University, Stanford, California; Bioscience Division, SLAC National Accelerator Laboratory, Menlo Park, California. Electronic address: soichi.wakatsuki@stanford.edu.
Stanford University · USSLAC National Accelerator Laboratory · USUniversity of British Columbia · CAMenlo School · US

Funding

X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
Integration of regulatory networks and subcellular architecture to control the Caulobacter cell cycleR35GM118071 · NIGMS · STANFORD UNIVERSITY · PI SHAPIRO, LUCILLE · 2016 to 2020
$3.2M
NIGMS NIH HHS P41 GM103393
6 · The paper itself

Abstract

Surface layers (S-layers) are paracrystalline, proteinaceous structures found in most archaea and many bacteria. Often the outermost cell envelope component, S-layers serve diverse functions including aiding pathogenicity and protecting against predators. We report that the S-layer of Caulobacter crescentus exhibits calcium-mediated structural plasticity, switching irreversibly between an amorphous aggregate state and the crystalline state. This finding invalidates the common assumption that S-layers serve only as static wall-like structures. In vitro, the Caulobacter S-layer protein, RsaA, enters the aggregate state at physiological temperatures and low divalent calcium ion concentrations. At higher concentrations, calcium ions stabilize monomeric RsaA, which can then transition to the two-dimensional crystalline state. Caulobacter requires micromolar concentrations of calcium for normal growth and development. Without an S-layer, Caulobacter is even more sensitive to changes in environmental calcium concentration. Therefore, this structurally dynamic S-layer responds to environmental conditions as an ion sensor and protects Caulobacter from calcium deficiency stress, a unique mechanism of bacterial adaptation. These findings provide a biochemical and physiological basis for RsaA's calcium-binding behavior, which extends far beyond calcium's commonly accepted role in aiding S-layer biogenesis or oligomerization and demonstrates a connection to cellular fitness.

Indexed as

CalciumCaulobacter crescentusCircular DichroismCrystallizationMembrane GlycoproteinsMicroscopy, Electron, TransmissionProtein AggregatesProtein FoldingScattering, Small AngleStress, PhysiologicalTemperatureX-Ray DiffractionCalciumMembrane GlycoproteinsProtein AggregatesS-layer proteins

Identifiers

PMID28494955
PMCPMC5425405
OpenAlexW2612476015

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.