Evidence map›Paper›PMID 28493866›Full record

Trial reportPloS one2017

Initial assessment of the infant with neonatal cholestasis-Is this biliary atresia?

Benjamin L Shneider, Jeff Moore, Nanda Kerkar, John C Magee, Wen Ye, Saul J Karpen, Binita M Kamath, Jean P Molleston, Jorge A Bezerra, Karen F Murray and 11 more

Registry-linked trialOpen access · goldAbstract readClinical TrialMulticenter Study
In one paragraph

Trial report in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT00061828 (Childhood Liver Disease Research Network), which is not on this map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00061828 recruitingnot on this map

Childhood Liver Disease Research Network (ChiLDReN): A Prospective Database of Infants With Cholestasis

TypeobservationalSponsorArbor Research Collaborative for HealthRan2004 to 2029Enrolled1,000ConditionsBiliary Atresia
3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 58 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 17 institutions in 3 countries.

Benjamin L ShneiderPediatric Gastroenterology, Hepatology, and Nutrition; Baylor College of Medicine; Houston, Texas, United States.
Jeff MooreDepartment of Biostatistics; University of Michigan; Ann Arbor, Michigan, United States.
Nanda KerkarChildren's Hospital of Los Angeles; Los Angeles, California, United States.
John C MageeUniversity of Michigan Medical School; Ann Arbor, Michigan, United States.
Wen YeDepartment of Biostatistics; University of Michigan; Ann Arbor, Michigan, United States.
Saul J KarpenPediatric Gastroenterology, Hepatology, and Nutrition; Emory University School of Medicine/Children's Healthcare of Atlanta; Atlanta, Georgia, United States.
Binita M KamathDivision of Gastroenterology, Hepatology, and Nutrition; Hospital for Sick Children and University of Toronto; Toronto, Ontario, Canada.
Jean P MollestonPediatric Gastroenterology, Hepatology, and Nutrition; Indiana University School of Medicine/Riley Hospital for Children; Indianapolis, Indiana, United States.
Jorge A BezerraDivision of Pediatric Gastroenterology, Hepatology, and Nutrition; Cincinnati Children's Hospital Medical Center; Cincinnati, Ohio, United States.
Karen F MurrayDivision of Gastroenterology and Hepatology; University of Washington Medical Center; Seattle Children's; Seattle, Washington, United States.
Kathleen M LoomesPediatric Gastroenterology, Hepatology, and Nutrition; Children's Hospital of Philadelphia; Philadelphia, Pennsylvania, United States.
Peter F WhitingtonPediatrics Division of Gastroenterology, Hepatology, and Nutrition; Ann and Robert H. Lurie Children's Hospital of Chicago; Chicago, Illinois, United States.
Philip RosenthalDivision of Gastroenterology, Hepatology, and Nutrition; Department of Pediatrics; University of California San Francisco; San Francisco, California, United States.
Robert H SquiresChildren's Hospital of Pittsburgh; Pittsburgh, Pennsylvania, United States.
Stephen L GutheryPediatric Gastroenterology, Hepatology, and Nutrition; University of Utah; Salt Lake City, Utah, United States.
Ronen ArnonMount Sinai; New York, New York, United States.
Kathleen B SchwarzJohns Hopkins School of Medicine; Baltimore, Maryland, United States.
Yumirle P TurmelleWashington University School of Medicine; St. Louis, Missouri, United States.
Averell H SherkerLiver Diseases Research Branch; National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; Bethesda, Maryland, United States.
Ronald J SokolSection of Pediatric Gastroenterology, Hepatology, and Nutrition, Department of Pediatrics; University of Colorado School of Medicine; Children's Hospital Colorado; Aurora, Colorado, United States.
Childhood Liver Disease Research Network
University of Michigan–Ann Arbor · USMount Sinai Medical Center · USBaylor College of Medicine · USChildren's Healthcare of Atlanta · USChildren's Hospital Colorado · USChildren's Hospital of Philadelphia · USChildren's Hospital of Pittsburgh · USCincinnati Children's Hospital Medical Center · USIndiana University School of MedicineJohns Hopkins University · USLurie Children's Hospital · USNational Institute of Diabetes and Digestive and Kidney Diseases · USSickKids Foundation · CAUniversity of California, San Francisco · USUniversity of Utah · USUniversity of Washington Medical Center · USWashington University in St. Louis · US

Funding

Childhood Liver Disease Research Network Data Coordinating CenterU01DK062456 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MAGEE, JOHN C, MERION, ROBERT M · 2002 to 2019
$36.8M
Atlanta Clinical and Translational Science Institute (ACTSI) RenewalUL1TR000454 · NCATS · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2012 to 2016
$25.8M
Stem Cell/Organoid and Genome Editing CoreP30DK078392 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI Alexander Miethke · 2007 to 2026
$24.4M
Indiana Clinical and Translational Sciences InstituteUL1TR001108 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI DENNE, SCOTT C., SHEKHAR, ANANTHA · 2013 to 2017
$23.3M
Clinical Center for Cholestatic Liver Disease in ChildrenU01DK062497 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI Alexander Miethke · 2002 to 2026
$13.2M
Mid-Atlantic BANH Consortium SiteU01DK062481 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI Binita Maya Kamath, Kathleen Mary Loomes · 2002 to 2026
$9.2M
Macrophage Cell Subset Specific Biomarkers for Disease Prognosis in Biliary AtresiaU01DK062436 · NIDDK · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI ALONSO, ESTELLA M. · 2002 to 2023
$7.0M
The Pittsburgh Cholestatic Liver Disease ConsortiumU01DK062466 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HORSLEN, SIMON · 2002 to 2023
$6.3M
Continuation of ChiLDReN, the Childhood Liver Disease Research Network: Indiana UniversityU01DK084536 · NIDDK · INDIANA UNIVERSITY INDIANAPOLIS · PI MOLLESTON, JEAN PAPPAS · 2009 to 2023
$5.9M
Continuation of the Childhood Liver Disease Research Network Seattle Clinical CenterU01DK084575 · NIDDK · SEATTLE CHILDREN'S HOSPITAL · PI Pamela Valentino · 2009 to 2026
$5.2M
Intermountain West Clinical Center for a Childhood Liver Disease Research NetworkU01DK103140 · NIDDK · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Stephen L Guthery · 2014 to 2026
$5.2M
Clinical Center for ChiLDREN: Pathogenesis, Biomarkers, and Antifibrotic TherapyU01DK103149 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI BENJAMIN L SHNEIDER · 2014 to 2026
$4.8M
NCATS NIH HHS UL1 TR000454NCATS NIH HHS UL1 TR001108NIDDK NIH HHS P30 DK078392NIDDK NIH HHS U01 DK062436NIDDK NIH HHS U01 DK062456NIDDK NIH HHS U01 DK062466NIDDK NIH HHS U01 DK062481NIDDK NIH HHS U01 DK062497NIDDK NIH HHS U01 DK062500NIDDK NIH HHS U01 DK084536NIDDK NIH HHS U01 DK084575NIDDK NIH HHS U01 DK103140NIDDK NIH HHS U01 DK103149
6 · The paper itself

Abstract

introductionOptimizing outcome in biliary atresia (BA) requires timely diagnosis. Cholestasis is a presenting feature of BA, as well as other diagnoses (Non-BA). Identification of clinical features of neonatal cholestasis that would expedite decisions to pursue subsequent invasive testing to correctly diagnose or exclude BA would enhance outcomes. The analytical goal was to develop a predictive model for BA using data available at initial presentation.

methodsInfants at presentation with neonatal cholestasis (direct/conjugated bilirubin >2 mg/dl [34.2 μM]) were enrolled prior to surgical exploration in a prospective observational multi-centered study (PROBE-NCT00061828). Clinical features (physical findings, laboratory results, gallbladder sonography) at enrollment were analyzed. Initially, 19 features were selected as candidate predictors. Two approaches were used to build models for diagnosis prediction: a hierarchical classification and regression decision tree (CART) and a logistic regression model using a stepwise selection strategy.

resultsIn PROBE April 2004-February 2014, 401 infants met criteria for BA and 259 for Non-BA. Univariate analysis identified 13 features that were significantly different between BA and Non-BA. Using a CART predictive model of BA versus Non-BA (significant factors: gamma-glutamyl transpeptidase, acholic stools, weight), the receiver operating characteristic area under the curve (ROC AUC) was 0.83. Twelve percent of BA infants were misclassified as Non-BA; 17% of Non-BA infants were misclassified as BA. Stepwise logistic regression identified seven factors in a predictive model (ROC AUC 0.89). Using this model, a predicted probability of >0.8 (n = 357) yielded an 81% true positive rate for BA; <0.2 (n = 120) yielded an 11% false negative rate.

conclusionDespite the relatively good accuracy of our optimized prediction models, the high precision required for differentiating BA from Non-BA was not achieved. Accurate identification of BA in infants with neonatal cholestasis requires further evaluation, and BA should not be excluded based only on presenting clinical features.

Indexed as

Diagnosis, DifferentialBiliary AtresiaBilirubinBiopsyCholestasisFemaleFollow-Up StudiesGallbladderHumansInfantInfant, NewbornProspective StudiesBilirubin

Identifiers

PMID28493866
PMCPMC5426590
OpenAlexW2612680923

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.