Evidence map›Paper›PMID 28493148›Full record

ArticleExtremophiles : life under extreme conditions2017

Diversity of bacteria and archaea from two shallow marine hydrothermal vents from Vulcano Island.

Garabed Antranikian, Marcel Suleiman, Christian Schäfers, Michael W W Adams, Simonetta Bartolucci, Jenny M Blamey, Nils-Kåre Birkeland, Elizaveta Bonch-Osmolovskaya, Milton S da Costa, Don Cowan and 17 more

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In one paragraph

Article in Extremophiles : life under extreme conditions, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 51 citations in OpenAlex.

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  6. Extremophiles in a changing world.Extremophiles : life under extreme conditions · 2024
    Review
  7. Hyperthermophile diversity microbes in the Calientes geothermal field, Tacna, Peru.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 3 institutions in 1 country.

Garabed AntranikianInstitute of Technical Microbiology, Hamburg University of Technology, Kasernenstr. 12, 21073, Hamburg, Germany. antranikian@tuhh.de.
Marcel SuleimanInstitute of Technical Microbiology, Hamburg University of Technology, Kasernenstr. 12, 21073, Hamburg, Germany.
Christian SchäfersInstitute of Technical Microbiology, Hamburg University of Technology, Kasernenstr. 12, 21073, Hamburg, Germany.
Michael W W AdamsPyrotoga Team, Hamburg, Germany.
Simonetta BartolucciPyrotoga Team, Hamburg, Germany.
Jenny M BlameyPyrotoga Team, Hamburg, Germany.
Nils-Kåre BirkelandPyrotoga Team, Hamburg, Germany.
Elizaveta Bonch-OsmolovskayaPyrotoga Team, Hamburg, Germany.
Milton S da CostaPyrotoga Team, Hamburg, Germany.
Don CowanPyrotoga Team, Hamburg, Germany.
Michael DansonPyrotoga Team, Hamburg, Germany.
Patrick ForterrePyrotoga Team, Hamburg, Germany.
Robert KellyPyrotoga Team, Hamburg, Germany.
Yoshizumi IshinoPyrotoga Team, Hamburg, Germany.
Jennifer LittlechildPyrotoga Team, Hamburg, Germany.
Marco MoracciPyrotoga Team, Hamburg, Germany.
Kenneth NollPyrotoga Team, Hamburg, Germany.
Tairo OshimaPyrotoga Team, Hamburg, Germany.
Frank RobbPyrotoga Team, Hamburg, Germany.
Mosè RossiPyrotoga Team, Hamburg, Germany.
Helena SantosPyrotoga Team, Hamburg, Germany.
Peter SchönheitPyrotoga Team, Hamburg, Germany.
Reinhard SternerPyrotoga Team, Hamburg, Germany.
Rudolf ThauerPyrotoga Team, Hamburg, Germany.
Michael ThommPyrotoga Team, Hamburg, Germany.
Jürgen WiegelPyrotoga Team, Hamburg, Germany.
Karl Otto StetterPyrotoga Team, Hamburg, Germany.
Universität Hamburg · DEHamburg University of Technology · DEUniversity of Regensburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To obtain new insights into community compositions of hyperthermophilic microorganisms, defined as having optimal growth temperatures of 80 °C and above, sediment and water samples were taken from two shallow marine hydrothermal vents (I and II) with temperatures of 100 °C at Vulcano Island, Italy. A combinatorial approach of denaturant gradient gel electrophoresis (DGGE) and metagenomic sequencing was used for microbial community analyses of the samples. In addition, enrichment cultures, growing anaerobically on selected polysaccharides such as starch and cellulose, were also analyzed by the combinatorial approach. Our results showed a high abundance of hyperthermophilic archaea, especially in sample II, and a comparable diverse archaeal community composition in both samples. In particular, the strains of the hyperthermophilic anaerobic genera Staphylothermus and Thermococcus, and strains of the aerobic hyperthermophilic genus Aeropyrum, were abundant. Regarding the bacterial community, ε-Proteobacteria, especially the genera Sulfurimonas and Sulfurovum, were highly abundant. The microbial diversity of the enrichment cultures changed significantly by showing a high dominance of archaea, particularly the genera Thermococcus and Palaeococcus, depending on the carbon source and the selected temperature.

Indexed as

Marine BiologyArchaeaBacteriaHydrothermal VentsItalyRNA, Ribosomal, 16SRNA, Ribosomal, 16SArchaeaDiversityHydrothermal marine shallow ventsHyperthermophiles

Identifiers

PMID28493148
OpenAlexW2612906303

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.