Evidence map›Paper›PMID 28493042›Full record

ArticleJournal of mathematical biology2017

On the stochastic evolution of finite populations.

Fabio A C C Chalub, Max O Souza

Open access · greenAbstract read
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In one paragraph

Article in Journal of mathematical biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 2 countries.

Fabio A C C ChalubDepartamento de Matemática and Centro de Matemática e Aplicações, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Quinta da Torre, 2829-516, Caparica, Portugal. chalub@fct.unl.pt.ORCID 0000-0002-8081-9221
Max O SouzaDepartamento de Matemática Aplicada, Universidade Federal Fluminense, R. Mário Santos Braga, s/n, Niterói, RJ, 22240-920, Brasil.ORCID 0000-0001-8200-1899
Universidade Federal Fluminense · BRUniversidade Nova de Lisboa · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This work is a systematic study of discrete Markov chains that are used to describe the evolution of a two-types population. Motivated by results valid for the well-known Moran (M) and Wright-Fisher (WF) processes, we define a general class of Markov chains models which we term the Kimura class. It comprises the majority of the models used in population genetics, and we show that many well-known results valid for M and WF processes are still valid in this class. In all Kimura processes, a mutant gene will either fixate or become extinct, and we present a necessary and sufficient condition for such processes to have the probability of fixation strictly increasing in the initial frequency of mutants. This condition implies that there are WF processes with decreasing fixation probability-in contradistinction to M processes which always have strictly increasing fixation probability. As a by-product, we show that an increasing fixation probability defines uniquely an M or WF process which realises it, and that any fixation probability with no state having trivial fixation can be realised by at least some WF process. These results are extended to a subclass of processes that are suitable for describing time-inhomogeneous dynamics. We also discuss the traditional identification of frequency dependent fitnesses and pay-offs, extensively used in evolutionary game theory, the role of weak selection when the population is finite, and the relations between jumps in evolutionary processes and frequency dependent fitnesses.

Indexed as

Evolution, MolecularModels, GeneticAnimalsGame TheoryGenetic FitnessGenetics, PopulationMarkov ChainsMathematical ConceptsMutationPopulation DynamicsProbabilitySelection, GeneticStochastic ProcessesFixation probabilitiesPerron–Frobenius propertyPopulation geneticsStochastically ordered processesStochastic processesTime-inhomogeneous Markov chains

Identifiers

PMID28493042
OpenAlexW2614609276

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.