Evidence map›Paper›PMID 28491032›Full record

ArticleFrontiers in neuroinformatics2017

Topological Filtering of Dynamic Functional Brain Networks Unfolds Informative Chronnectomics: A Novel Data-Driven Thresholding Scheme Based on Orthogonal Minimal Spanning Trees (OMSTs).

Stavros I Dimitriadis, Christos Salis, Ioannis Tarnanas, David E Linden

Open access · goldAbstract read
In one paragraph

Article in Frontiers in neuroinformatics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 130 citations in OpenAlex.

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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Stavros I DimitriadisInstitute of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff UniversityCardiff, UK.
Christos SalisDepartment of Informatics and Telecommunications Engineering, University of Western MacedoniaKozani, Greece.
Ioannis TarnanasHealth-IS Lab, Chair of Information Management, ETH ZurichZurich, Switzerland.
David E LindenInstitute of Psychological Medicine and Clinical Neurosciences, School of Medicine, Cardiff UniversityCardiff, UK.
Cardiff University · GBAristotle University of Thessaloniki · GRUniversity of Western Macedonia · GR

Funding

Medical Research Council MR/K004360/1Medical Research Council MR/L010305/1
6 · The paper itself

Abstract

The human brain is a large-scale system of functionally connected brain regions. This system can be modeled as a network, or graph, by dividing the brain into a set of regions, or "nodes," and quantifying the strength of the connections between nodes, or "edges," as the temporal correlation in their patterns of activity. Network analysis, a part of graph theory, provides a set of summary statistics that can be used to describe complex brain networks in a meaningful way. The large-scale organization of the brain has features of complex networks that can be quantified using network measures from graph theory. The adaptation of both bivariate (mutual information) and multivariate (Granger causality) connectivity estimators to quantify the synchronization between multichannel recordings yields a fully connected, weighted, (a)symmetric functional connectivity graph (FCG), representing the associations among all brain areas. The aforementioned procedure leads to an extremely dense network of tens up to a few hundreds of weights. Therefore, this FCG must be filtered out so that the "true" connectivity pattern can emerge. Here, we compared a large number of well-known topological thresholding techniques with the novel proposed data-driven scheme based on orthogonal minimal spanning trees (OMSTs). OMSTs filter brain connectivity networks based on the optimization between the global efficiency of the network and the cost preserving its wiring. We demonstrated the proposed method in a large EEG database (

Indexed as

dynamic functional connectivityEEGfMRIgraph theoryminimal spanning treephase locking valueresting statetopological filtering

Identifiers

PMID28491032
PMCPMC5405139
OpenAlexW2609746265

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.