Evidence map›Paper›PMID 28488849›Full record

ArticleBiochemistry2017

Solution Conformations and Dynamics of Substrate-Bound Cytochrome P450 MycG.

Drew R Tietz, Larissa M Podust, David H Sherman, Thomas C Pochapsky

Abstract read
In one paragraph

Article in Biochemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Entropic contribution to enhanced thermal stability in the thermostable P450 CYP119.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Drew R Tietz
Larissa M PodustSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California , San Diego, California 92093, United States.
David H ShermanLife Sciences Institute, University of Michigan , Ann Arbor, Michigan 48109-2216, United States.ORCID 0000-0001-8334-3647
Thomas C PochapskyORCID 0000-0001-8995-1088

Funding

STRUCTURE AND DYNAMICS OF METAL-CONTAINING PROTEINSR01GM044191 · NIGMS · BRANDEIS UNIVERSITY · PI POCHAPSKY, THOMAS CHARLES · 1995 to 2012
$3.4M
Structure and Engineering of Natural Product Cytochrome P450 EnzymesR01GM078553 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MONTGOMERY, JOHN, PODUST, LARISSA M. · 2007 to 2015
$2.9M
NIGMS NIH HHS R01 GM044191NIGMS NIH HHS R01 GM078553
6 · The paper itself

Abstract

MycG is a P450 monooxygenase that catalyzes the sequential hydroxylation and epoxidation of mycinamicin IV (M-IV), the last two steps in the biosynthesis of mycinamicin II, a macrolide antibiotic isolated from Micromonospora griseorubida. The crystal structure of MycG with M-IV bound was previously determined but showed the bound substrate in an orientation that did not rationalize the observed regiochemistry of M-IV hydroxylation. Nuclear magnetic resonance paramagnetic relaxation enhancements provided evidence of an orientation of M-IV in the MycG active site more compatible with the observed chemistry, but substrate-induced changes in the enzyme structure were not characterized. We now describe the use of amide

Indexed as

Molecular Dynamics SimulationBacterial ProteinsCytochrome P-450 Enzyme SystemModels, MolecularNuclear Magnetic Resonance, BiomolecularProtein ConformationSolutionsSubstrate SpecificityBacterial ProteinsCytochrome P-450 Enzyme SystemMycG protein, MicromonosporaSolutions

Identifiers

PMID28488849
PMCPMC5520640

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.