Evidence map›Paper›PMID 28487881›Full record

ArticleCold Spring Harbor molecular case studies2017

Whole-genome sequencing identifies homozygous

Karin Purshouse, Anna Schuh, Benjamin P Fairfax, Sam Knight, Pavlos Antoniou, Helene Dreau, Niko Popitsch, Kevin Gatter, Ian Roberts, Lisa Browning and 6 more

Open access · diamondAbstract readCase Reports
In one paragraph

Article in Cold Spring Harbor molecular case studies, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 1 country.

Karin PurshouseOxford Cancer and Haematology Centre, Churchill Hospital, Headington, Oxford OX3 7LE, United Kingdom.
Anna SchuhOxford National Institute for Health Research, Biomedical Research Centre/NHS Translational Diagnostics Centre, The Joint Research Office, The Churchill Hospital, Headington, Oxford OX3 7LE, United Kingdom.
Benjamin P FairfaxOxford Cancer and Haematology Centre, Churchill Hospital, Headington, Oxford OX3 7LE, United Kingdom.
Sam KnightWellcome Trust Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, United Kingdom.
Pavlos AntoniouOxford National Institute for Health Research, Biomedical Research Centre/NHS Translational Diagnostics Centre, The Joint Research Office, The Churchill Hospital, Headington, Oxford OX3 7LE, United Kingdom.
Helene DreauOxford National Institute for Health Research, Biomedical Research Centre/NHS Translational Diagnostics Centre, The Joint Research Office, The Churchill Hospital, Headington, Oxford OX3 7LE, United Kingdom.
Niko PopitschWellcome Trust Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, United Kingdom.
Kevin GatterNuffield Division of Clinical Laboratory Sciences, Radcliffe Department of Medicine, University of Oxford, John Radcliffe Hospital, Oxford OX3 9DU, United Kingdom.
Ian RobertsMolecular Oncology and Haematology Unit, Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, Oxford OX3 9DS, United Kingdom.
Lisa BrowningDepartment of Cellular Pathology, John Radcliffe Hospital, Oxford University Hospitals NHS Foundation Trust, Oxford OX3 9DU, United Kingdom.
Zoe TraillDepartment of Radiology, John Radcliffe Hospital, Oxford University Hospitals NHS Foundation Trust, Oxford OX3 9DU, United Kingdom.
David KerrOxford Cancer and Haematology Centre, Churchill Hospital, Headington, Oxford OX3 7LE, United Kingdom.
Clare VerrillDepartment of Cellular Pathology, John Radcliffe Hospital, Oxford University Hospitals NHS Foundation Trust, Oxford OX3 9DU, United Kingdom.
Mark TuthillOxford Cancer and Haematology Centre, Churchill Hospital, Headington, Oxford OX3 7LE, United Kingdom.
Jenny C TaylorOxford National Institute for Health Research, Biomedical Research Centre/NHS Translational Diagnostics Centre, The Joint Research Office, The Churchill Hospital, Headington, Oxford OX3 7LE, United Kingdom.
Andrew ProtheroeOxford Cancer and Haematology Centre, Churchill Hospital, Headington, Oxford OX3 7LE, United Kingdom.
Churchill Hospital · GBUniversity of Oxford · GBCentre for Human Genetics · GBJohn Radcliffe Hospital · GBNational Institute for Health Research · GB

Funding

Department of HealthWellcome Trust 201488/Z/16/Z
6 · The paper itself

Abstract

Whole-genome sequencing (WGS) has transformed the understanding of the genetic drivers of cancer and is increasingly being used in cancer medicine to identify personalized therapies. Here we describe a case in which the application of WGS identified a tumoral

Indexed as

BiopsyBRCA2 ProteinGerm-Line MutationHomozygoteHumansMaleMiddle AgedMutationPoly(ADP-ribose) Polymerase InhibitorsPoly(ADP-ribose) PolymerasesPrecision MedicineProstatic NeoplasmsSequence DeletionWhole Genome SequencingBRCA2 ProteinBRCA2 protein, humanPoly(ADP-ribose) Polymerase InhibitorsPoly(ADP-ribose) Polymerasesmalignant genitourinary tract tumorprostate cancer

Identifiers

PMID28487881
PMCPMC5411692
OpenAlexW2592581450

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.