Evidence map›Paper›PMID 28486945›Full record

ArticleVirology journal2017

Transcription profiles of the responses of chicken bursae of Fabricius to IBDV in different timing phases.

Changbo Ou, Qiuxia Wang, Yanhong Zhang, Weili Kong, Shouping Zhang, Yan Yu, Jinyou Ma, Xingyou Liu, Xianghui Kong

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 34 citations in OpenAlex.

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  6. Microorganisms · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Changbo OuCollege of Life Science, Henan Normal University, Xinxiang, 453007, Henan, China.
Qiuxia WangPostdoctoral Research and Development Base, Henan Institute of Science and Technology, Xinxiang, 453003, Henan, China.
Yanhong ZhangCollege of Animal Science and veterinary medicine, Henan Institute of Science and Technology, Xinxiang, 453003, Henan, China.
Weili KongDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY, 14642, USA.
Shouping ZhangCollege of Animal Science and veterinary medicine, Henan Institute of Science and Technology, Xinxiang, 453003, Henan, China.
Yan YuCollege of Animal Science and veterinary medicine, Henan Institute of Science and Technology, Xinxiang, 453003, Henan, China.
Jinyou MaCollege of Animal Science and veterinary medicine, Henan Institute of Science and Technology, Xinxiang, 453003, Henan, China.
Xingyou LiuPostdoctoral Research and Development Base, Henan Institute of Science and Technology, Xinxiang, 453003, Henan, China. lxingyou@sohu.com.
Xianghui KongCollege of Life Science, Henan Normal University, Xinxiang, 453007, Henan, China. xhkong@htu.cn.
Henan Institute of Science and Technology · CNHenan Normal University · CNUniversity of Rochester Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundInfectious bursal disease virus (IBDV) infection causes immunosuppression in chickens and increases their susceptibility to secondary infections. To explore the interaction between host and IBDV, RNA-Seq was applied to analyse the transcriptional profiles of the responses of chickens' bursas of Fabricius in the early stage of IBDV infection.

resultsThe results displayed that a total of 15546 genes were identified in the chicken bursa libraries. Among the annotated genes, there were 2006 and 4668 differentially expressed genes in the infection group compared with the mock group on day 1 and day 3 post inoculation (1 and 3 dpi), respectively. Moreover, there were 676 common up-regulated and 83 common down-regulated genes in the bursae taken from the chickens infected with IBDV on both 1 and 3 dpi. Meanwhile, there were also some characteristic differentially expressed genes on 1 and 3 dpi. On day 1 after inoculation with IBDV, host responses mainly displayed immune response processes, while metabolic pathways played an important role on day three post infection. Six genes were confirmed by quantitative reverse transcription-PCR.

conclusionsIn conclusion, the differential gene expression profile demonstrated with RNA-Seq might offer a better understanding of the molecular interactions between host and IBDV during the early stage of infection.

Indexed as

AnimalsAntigens, ViralBirnaviridae InfectionsBursa of FabriciusChickensGene Expression ProfilingGene Expression RegulationImmunity, InnateImmunosuppression TherapyInfectious bursal disease virusPoultry DiseasesRNA, ViralSequence Analysis, RNAViral Structural ProteinsAntigens, ViralRNA, ViralViral Structural ProteinsVP2 protein, infectious bursal disease virusBursa of FabriciusChickenInfectious bursal disease virusRNA-SeqTranscription profiles

Identifiers

PMID28486945
PMCPMC5424287
OpenAlexW2612618486

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.