Evidence map›Paper›PMID 28485999›Full record

ArticleCancer biology & therapy2018

IGF2 mRNA binding protein 3 (IMP3) mediated regulation of transcriptome and translatome in glioma cells.

Shruti Bhargava, Vikas Patil, Riyaz Ahmad Shah, Kumaravel Somasundaram

Open access · bronzeAbstract read
In one paragraph

Article in Cancer biology & therapy, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

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  9. m6A modification in RNA: biogenesis, functions and roles in gliomas.Journal of experimental & clinical cancer research : CR · 2020
    Review
  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Shruti Bhargavaa Department of Microbiology and Cell Biology , Indian Institute of Science , Bangalore , India.
Vikas Patila Department of Microbiology and Cell Biology , Indian Institute of Science , Bangalore , India.
Riyaz Ahmad Shaha Department of Microbiology and Cell Biology , Indian Institute of Science , Bangalore , India.
Kumaravel Somasundarama Department of Microbiology and Cell Biology , Indian Institute of Science , Bangalore , India.
Indian Institute of Science Bangalore · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA binding proteins mediate global regulation at the level of transcriptome and translatome of a cell. We studied the global level expression changes regulated by IMP3 in transcriptome and translatome by performing microarray using total cellular RNA and heavy polysome derived RNA of IMP3 silenced glioma cells respectively. Differentially regulated transcripts at the transcriptome level (n = 2388) and at the level of translatome (n = 479) were identified. Further, these transcripts were classified as direct and indirect targets on the basis of presence of IMP3 binding site. Additional investigation revealed that direct targets at transcriptome level were found to be associated with processes related to cell cycle, whereas direct targets at the translatome level participated in apoptosis related pathways. Probable mechanism of indirect regulation at both the levels is also investigated. Collectively, our study reveals multi-level gene expression regulation imposed by IMP3 in glioma cells.

Indexed as

Gene Expression Regulation, NeoplasticApoptosisBinding SitesCell CycleCell Line, TumorGene Expression ProfilingGene Knockdown TechniquesGlioblastomaHumansOligonucleotide Array Sequence AnalysisProtein BiosynthesisRNA-Binding ProteinsRNA, Small InterferingTranscriptomeIGF2BP3 protein, humanRNA-Binding ProteinsRNA, Small InterferingIMP3microarraypolysomeRNA stabilitytranslation

Identifiers

PMID28485999
PMCPMC5790340
OpenAlexW2612950558

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.