Evidence map›Paper›PMID 28485919›Full record

ArticleACS chemical biology2017

Stabilization of Glucocerebrosidase by Active Site Occupancy.

Fredj Ben Bdira, Wouter W Kallemeijn, Saskia V Oussoren, Saskia Scheij, Boris Bleijlevens, Bogdan I Florea, Cindy P A A van Roomen, Roelof Ottenhoff, Marielle J F M van Kooten, Marthe T C Walvoort and 5 more

Open access · hybridAbstract read
In one paragraph

Article in ACS chemical biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

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  6. Review
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  8. Design, Synthesis and Structural Analysis of Glucocerebrosidase Imaging Agents.Chemistry (Weinheim an der Bergstrasse, Germany) · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

Fredj Ben Bdira
Wouter W KallemeijnORCID 0000-0002-3660-2930
Saskia V Oussoren
Saskia ScheijDepartment of Medical Biochemistry Academic Medical Center, University of Amsterdam , Amsterdam 1105 AZ, The Netherlands.
Boris BleijlevensDepartment of Medical Biochemistry Academic Medical Center, University of Amsterdam , Amsterdam 1105 AZ, The Netherlands.
Bogdan I Florea
Cindy P A A van RoomenDepartment of Medical Biochemistry Academic Medical Center, University of Amsterdam , Amsterdam 1105 AZ, The Netherlands.
Roelof OttenhoffDepartment of Medical Biochemistry Academic Medical Center, University of Amsterdam , Amsterdam 1105 AZ, The Netherlands.
Marielle J F M van Kooten
Marthe T C Walvoort
Rolf G Boot
Marcellus Ubbink
Herman S OverkleeftORCID 0000-0001-6976-7005
Johannes M F G AertsDepartment of Medical Biochemistry Academic Medical Center, University of Amsterdam , Amsterdam 1105 AZ, The Netherlands.
Amsterdam UMC Location University of Amsterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glucocerebrosidase (GBA) is a lysosomal β-glucosidase that degrades glucosylceramide. Its deficiency results in Gaucher disease (GD). We examined the effects of active site occupancy of GBA on its structural stability. For this, we made use of cyclophellitol-derived activity-based probes (ABPs) that bind irreversibly to the catalytic nucleophile (E340), and for comparison, we used the potent reversible inhibitor isofagomine. We demonstrate that cyclophellitol ABPs improve the stability of GBA in vitro, as revealed by thermodynamic measurements (T

Indexed as

AnimalsBinding SitesCatalytic DomainEnzyme StabilityGlucosylceramidaseImino PyranosesLiverMiceMolecular StructureTemperatureGlucosylceramidaseImino Pyranosesisofagomine

Identifiers

PMID28485919
PMCPMC5525105
OpenAlexW2613561463

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.