Evidence map›Paper›PMID 28485405›Full record

ArticleMolecular psychiatry2018

Investigating the neuroimmunogenic architecture of schizophrenia.

R Birnbaum, A E Jaffe, Q Chen, J H Shin, BrainSeq Consortium, J E Kleinman, T M Hyde, D R Weinberger

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular psychiatry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 70 citations in OpenAlex.

  1. Review
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  8. Neural Correlates of Social Decision-Making.Iranian journal of psychiatry · 2024
    Article
  9. Redox and Immune Signaling in Schizophrenia: New Therapeutic Potential.The international journal of neuropsychopharmacology · 2023
    Review
  10. Article
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  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

R BirnbaumLieber Institute for Brain Development, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
A E JaffeLieber Institute for Brain Development, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Q ChenLieber Institute for Brain Development, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
J H ShinLieber Institute for Brain Development, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
BrainSeq Consortium
J E KleinmanLieber Institute for Brain Development, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
T M HydeLieber Institute for Brain Development, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
D R WeinbergerLieber Institute for Brain Development, Johns Hopkins University School of Medicine, Baltimore, MD, USA.
Johns Hopkins University · USLieber Institute for Brain Development · USJohns Hopkins Medicine · US

Funding

White Matter Abnormalities in SchizophreniaP50MH066392 · NIMH · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI BUXBAUM, JOSEPH D. · 2002 to 2012
$18.6M
International Cohort Collection for Bipolar DisorderR01MH085542 · NIMH · MASSACHUSETTS GENERAL HOSPITAL · PI SMOLLER, JORDAN W · 2008 to 2012
$10.7M
Genetics Association in Schizophrenia and Other DisordersR37MH057881 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DEVLIN, BERNIE · 2013 to 2022
$5.4M
Identifying therapeutic targets for autism using Shank3-deficient miceR01MH093725 · NIMH · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BUXBAUM, JOSEPH D. · 2011 to 2015
$2.5M
1/3-Networks from Multidimensional Data for Schizophrenia and Related DisordersR01MH097276 · NIMH · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI SCHADT, ERIC E, SKLAR, PAMELA · 2012 to 2014
$2.5M
A Functional Investigation of Structural Variants Associated with SchizophreniaK23MH112955 · NIMH · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BIRNBAUM, REBECCA · 2018 to 2022
$795k
NIMH NIH HHS HHSN271201300031CNIMH NIH HHS K23 MH112955NIMH NIH HHS P50 MH066392NIMH NIH HHS R01 MH085542NIMH NIH HHS R01 MH093725NIMH NIH HHS R01 MH097276NIMH NIH HHS R37 MH057881
6 · The paper itself

Abstract

The role of the immune system in schizophrenia remains controversial despite numerous studies to date. Most studies have profiled expression of select genes or proteins in peripheral blood, but none have focused on the expression of canonical pathways that mediate overall immune response. The current study used a systematic genetic approach to investigate the role of the immune system in a large sample of post-mortem brain of patients with schizophrenia: RNA sequencing was performed to assess the differential expression of 561 immune genes and 20 immune pathways in dorsolateral prefrontal cortex (DLPFC) (144 schizophrenia and 196 control subjects) and hippocampus (83 schizophrenia and 187 control subjects). The effect of RNA quality on gene expression was found to be highly correlated with the effect of diagnosis even after adjustment for observable RNA quality parameters (i.e. RNA integrity), thus this confounding relationship was statistically controlled using principal components derived from the gene expression matrix. In DLPFC, 23 immune genes were found to be differentially expressed (false discovery rate <0.05), of which seven genes replicated in both directionality and at nominal significance (P<0.05) in an independent post-mortem DLPFC data set (182 schizophrenia and 212 control subjects), although notably at least five of these genes have prominent roles in pathways other than immune function and overall the effect sizes were minimal (fold change <1.1). In the hippocampus, no individual immune genes were identified to be differentially expressed, and in both DLPFC and hippocampus none of the individual immune pathways were relatively differentially expressed. Further, genomic schizophrenia risk profiles scores were not correlated with the expression of individual immune pathways or differentially expressed genes. Overall, past reports claiming a primary pathogenic role of the immune system intrinsic to the brain in schizophrenia could not be confirmed.

Indexed as

AdultBrainFemaleGene Expression ProfilingHumansMaleMiddle AgedNeuroimmunomodulationOligonucleotide Array Sequence AnalysisSchizophreniaSequence Analysis, RNA

Identifiers

PMID28485405
OpenAlexW2613320376

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.