Evidence map›Paper›PMID 28484899›Full record

ArticleJournal of computational neuroscience2017

Functional connectivity models for decoding of spatial representations from hippocampal CA1 recordings.

Lorenzo Posani, Simona Cocco, Karel Ježek, Rémi Monasson

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Article in Journal of computational neuroscience, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
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  4. The Structure of Hippocampal CA1 Interactions Optimizes Spatial Coding across Experience.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Lorenzo PosaniLaboratoire de Physique Statistique, Ecole Normale Supérieure and CNRS UMR 8550, PSL Research, Paris Sorbonne UPMC, 24 rue Lhomond, 75005, Paris, France. lorenzo.posani@gmail.com.ORCID http://orcid.org/0000-0003-1135-1300
Simona CoccoLaboratoire de Physique Statistique, Ecole Normale Supérieure and CNRS UMR 8550, PSL Research, Paris Sorbonne UPMC, 24 rue Lhomond, 75005, Paris, France.
Karel JežekLaboratory of Experimental Neurophysiology, Biomedical Center, Faculty of Medicine in Pilsen, Charles University in Prague, alej Svobody 1655/76, 32300, Pilsen, Czech Republic.
Rémi MonassonLaboratoire de Physique Théorique, Ecole Normale Supérieure and CNRS UMR 8549, PSL Research, Paris Sorbonne UPMC, 24 rue Lhomond, 75005, Paris, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hippocampus stores spatial representations, or maps, which are recalled each time a subject is placed in the corresponding environment. Across different environments of similar geometry, these representations show strong orthogonality in CA3 of hippocampus, whereas in the CA1 subfield a considerable overlap between the maps can be seen. The lower orthogonality decreases reliability of various decoders developed in an attempt to identify which of the stored maps is active at the moment. Especially, the problem with decoding emerges with a need to analyze data at high temporal resolution. Here, we introduce a functional-connectivity-based decoder, which accounts for the pairwise correlations between the spiking activities of neurons in each map and does not require any positional information, i.e. any knowledge about place fields. We first show, on recordings of hippocampal activity in constant environmental conditions, that our decoder outperforms existing decoding methods in CA1. Our decoder is then applied to data from teleportation experiments, in which an instantaneous switch between the environment identity triggers a recall of the corresponding spatial representation . We test the sensitivity of our approach on the transition dynamics between the respective memory states (maps). We find that the rate of spontaneous state shifts (flickering) after a teleportation event is increased not only within the first few seconds as already reported, but this instability is sustained across much longer (> 1 min.) periods.

Indexed as

MemoryModels, NeurologicalCA1 Region, HippocampalHippocampusHumansNeuronsReproducibility of ResultsBayesian inferenceCA1DecodingFunctional connectivityGraphical modelsHippocampusSpatial representation

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.