Evidence map›Paper›PMID 28484606›Full record

ArticleRoyal Society open science2017

An agent-based model of anoikis in the colon crypt displays novel emergent behaviour consistent with biological observations.

Tim Ingham-Dempster, Dawn C Walker, Bernard M Corfe

Open access · goldAbstract read
In one paragraph

Article in Royal Society open science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Observational
  6. Review
  7. Article
  8. Are Tumor Cell Lineages Solely Shaped by Mechanical Forces?Bulletin of mathematical biology · 2017
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Tim Ingham-DempsterInsigneo Institute for in silico medicine, Pam Liversedge Building, University of Sheffield, Sir Frederick Mappin Building, Mappin Street, Sheffield S1 3JD, UK.
Dawn C WalkerInsigneo Institute for in silico medicine, Pam Liversedge Building, University of Sheffield, Sir Frederick Mappin Building, Mappin Street, Sheffield S1 3JD, UK.
Bernard M CorfeInsigneo Institute for in silico medicine, Pam Liversedge Building, University of Sheffield, Sir Frederick Mappin Building, Mappin Street, Sheffield S1 3JD, UK.ORCID 0000-0003-0449-2228
Insigneo · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Colorectal cancer (CRC) is a major cause of cancer mortality. Colon crypts are multi-cellular flask-shaped invaginations of the colonic epithelium, with stem cells at their base which support the continual turnover of the epithelium with loss of cells by anoikis from the flat mucosa. Mutations in these stem cells can become embedded in the crypts, a process that is strongly implicated in CRC initiation. We describe a computational model which includes novel features, including an accurate representation of the geometry of the crypt mouth. Model simulations yield previously unseen emergent phenomena, such as localization of cell death to a small region of the crypt mouth which corresponds with that observed

Indexed as

agent-based modelanoikiscolonic crypthomeostasis

Identifiers

PMID28484606
PMCPMC5414243
OpenAlexW2606434909

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.