Evidence map›Paper›PMID 28484514›Full record

ArticleBiotechnology for biofuels2017

Increased lignocellulosic inhibitor tolerance of

Venkatachalam Narayanan, Jenny Schelin, Marie Gorwa-Grauslund, Ed Wj van Niel, Magnus Carlquist

Abstract read
In one paragraph

Article in Biotechnology for biofuels, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Automated yeast cultivation control using a biosensor and flow cytometry.Journal of industrial microbiology & biotechnology · 2024
    Article
  5. Frontiers in bioengineering and biotechnology · 2024
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Novel Approach in the Construction of 
Bioethanol-ProducingFood technology and biotechnology · 2019
    Article
  11. Physiological mechanism of improved tolerance ofBiotechnology for biofuels · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Venkatachalam NarayananDivision of Applied Microbiology, Department of Chemistry, Lund University, P.O. Box 124, SE 221 00 Lund, Sweden.
Jenny SchelinDivision of Applied Microbiology, Department of Chemistry, Lund University, P.O. Box 124, SE 221 00 Lund, Sweden.
Marie Gorwa-GrauslundDivision of Applied Microbiology, Department of Chemistry, Lund University, P.O. Box 124, SE 221 00 Lund, Sweden.
Ed Wj van NielDivision of Applied Microbiology, Department of Chemistry, Lund University, P.O. Box 124, SE 221 00 Lund, Sweden.
Magnus CarlquistDivision of Applied Microbiology, Department of Chemistry, Lund University, P.O. Box 124, SE 221 00 Lund, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundProduction of second-generation bioethanol and other bulk chemicals by yeast fermentation requires cells that tolerate inhibitory lignocellulosic compounds at low pH.

resultsIn this study, we assessed responses of isogenic yeast cell populations in different physiological states to combinations of acetic acid, vanillin and furfural at low pH. We found that cells in early stationary phase (ESP) exhibited significantly increased tolerance compared to cells in logarithmic phase, and had a similar ability to initiate growth in the presence of inhibitors as pre-adapted cells. The ESP cultures consisted of subpopulations with different buoyant cell densities which were isolated with flotation and analysed separately. These so-called quiescent (Q) and non-quiescent (NQ) cells were found to possess similar abilities to initiate growth in the presence of lignocellulosic inhibitors at pH 3.7, and had similar viabilities under static conditions. Therefore, differentiation into Q-cells was not the cause for increased tolerance of ESP cultures. Flow cytometry analysis of cell viability, intracellular pH and reactive oxygen species levels revealed that tolerant cell populations had a characteristic response upon inhibitor perturbations. Growth in the presence of a combination of inhibitors at low pH correlated with pre-cultures having a high frequency of cells with low pH

conclusionsESP cultures of

Indexed as

Acetic acidCarbon starvationFurfuralIntracellular pHPopulation heterogeneityQuiescenceReactive oxygen speciesStress toleranceVanillin

Identifiers

PMID28484514
PMCPMC5418707

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.