Evidence map›Paper›PMID 28484037›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Chromosome-level genome assembly and transcriptome of the green alga

Melissa S Roth, Shawn J Cokus, Sean D Gallaher, Andreas Walter, David Lopez, Erika Erickson, Benjamin Endelman, Daniel Westcott, Carolyn A Larabell, Sabeeha S Merchant and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 184 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Astaxanthin fromMarine drugs · 2025
    Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. A distinct LHCI arrangement is recruited to photosystem I in Fe-starved green algae.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  15. Article
  16. Leaky ribosomal scanning enables tunable translation of bicistronic ORFs in green algae.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  17. Article
  18. Article
  19. Article
  20. Evolution of the regulatory subunits for the heteromeric acetyl-CoA carboxylase.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Melissa S RothHoward Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720-3102.
Shawn J CokusDepartment of Molecular, Cell and Developmental Biology, University of California, Los Angeles, CA 90095.
Sean D GallaherDepartment of Chemistry and Biochemistry and Institute for Genomics and Proteomics, University of California, Los Angeles, CA 90095-1569.
Andreas WalterDepartment of Anatomy, University of California, San Francisco, CA 94143.
David LopezDepartment of Molecular, Cell and Developmental Biology, University of California, Los Angeles, CA 90095.
Erika EricksonHoward Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720-3102.
Benjamin EndelmanHoward Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720-3102.
Daniel WestcottHoward Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720-3102.
Carolyn A LarabellDepartment of Anatomy, University of California, San Francisco, CA 94143.
Sabeeha S MerchantDepartment of Chemistry and Biochemistry and Institute for Genomics and Proteomics, University of California, Los Angeles, CA 90095-1569; niyogi@berkeley.edu sabeeha@chem.ucla.edu matteop@mcdb.ucla.edu.
Matteo PellegriniDepartment of Molecular, Cell and Developmental Biology, University of California, Los Angeles, CA 90095; niyogi@berkeley.edu sabeeha@chem.ucla.edu matteop@mcdb.ucla.edu.
Krishna K NiyogiHoward Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, CA 94720-3102; niyogi@berkeley.edu sabeeha@chem.ucla.edu matteop@mcdb.ucla.edu.ORCID 0000-0001-7229-2071
Howard Hughes Medical Institute · USUniversity of California, Los Angeles · USLawrence Berkeley National Laboratory · US

Funding

Training Grant in Genomic Analysis and InterpretationT32HG002536 · NHGRI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Valerie A Arboleda, Harold Pimentel · 2002 to 2026
$8.6M
TrainingP41GM103445 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LARABELL, CAROLYN A · 2012 to 2019
$8.2M
Howard Hughes Medical InstituteNHGRI NIH HHS T32 HG002536NIGMS NIH HHS P41 GM103445
6 · The paper itself

Abstract

Microalgae have potential to help meet energy and food demands without exacerbating environmental problems. There is interest in the unicellular green alga

Indexed as

Base SequenceBiofuelsChlorophytaChromosome MappingChromosomes, PlantGenome, PlantMicroalgaeSequence Analysis, DNATranscriptomeXanthophyllsastaxanthineBiofuelsXanthophyllscarotenoid biosynthesisChlorophyceaede novo genomegenome mappingRNA-Seq

Identifiers

PMID28484037
PMCPMC5448231
OpenAlexW2613304904

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.