Evidence map›Paper›PMID 28483597›Full record

ArticleJournal of molecular and cellular cardiology2017

Sub-microscopic analysis of t-tubule geometry in living cardiac ventricular myocytes using a shape-based analysis method.

Cherrie H T Kong, Eva A Rog-Zielinska, Clive H Orchard, Peter Kohl, Mark B Cannell

Open access · hybridAbstract read
In one paragraph

Article in Journal of molecular and cellular cardiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  3. Article
  4. Article
  5. Article
  6. The mechanism of osmotically induced sealing of cardiac t tubules.American journal of physiology. Heart and circulatory physiology · 2020
    Article
  7. Calcium Signaling in Cardiomyocyte Function.Cold Spring Harbor perspectives in biology · 2020
    Review
  8. Species differences in the morphology of transverse tubule openings in cardiomyocytes.Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology · 2018
    Article
  9. Solute movement in the t-tubule system of rabbit and mouse cardiomyocytes.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  10. Review
  11. Article
  12. Reply to Entcheva: The impact of T-tubules on action potential propagation in cardiac tissue.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  13. Axial Tubule Junctions Activate Atrial CaFrontiers in physiology · 2018
    Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Cherrie H T KongSchool of Physiology, Pharmacology & Neuroscience, Faculty of Biomedical Sciences, University of Bristol, University Walk, Bristol BS8 1TD, United Kingdom.
Eva A Rog-ZielinskaNational Heart and Lung Institute, Harefield Heart Science Centre, Imperial College London, Harefield UB9 6JH, United Kingdom.
Clive H OrchardSchool of Physiology, Pharmacology & Neuroscience, Faculty of Biomedical Sciences, University of Bristol, University Walk, Bristol BS8 1TD, United Kingdom.
Peter KohlNational Heart and Lung Institute, Harefield Heart Science Centre, Imperial College London, Harefield UB9 6JH, United Kingdom; Institute for Experimental Cardiovascular Medicine, University Heart Centre Freiburg - Bad Krozingen, Medical School of the University of Freiburg, Elsaesser Str 2Q, 79110 Freiburg, Germany.
Mark B CannellSchool of Physiology, Pharmacology & Neuroscience, Faculty of Biomedical Sciences, University of Bristol, University Walk, Bristol BS8 1TD, United Kingdom. Electronic address: mark.cannell@bristol.ac.uk.
University of Bristol · GBHarefield Hospital · GBUniversity of Freiburg · DE

Funding

British Heart Foundation FS/12/17/29532British Heart Foundation FS/15/3/31047British Heart Foundation PG/14/42/30886British Heart Foundation PG/14/65/31055British Heart Foundation RG/12/10/29802Medical Research Council MR/N002903/1
6 · The paper itself

Abstract

Transverse-axial tubules (TTs) are key structures involved in cardiac excitation-contraction coupling and can become deranged in disease. Although optical measurement of TTs is frequently employed to assess TT abundance and regularity, TT dimensions are generally below the diffraction limit of optical microscopy so determination of tubule size is problematic. TT diameter was measured by labeling both local surface membrane area and volume with fluorescent probes (FM4-64 and calcein, respectively), correcting image asymmetry by image processing and using the relationship between surface area and volume for a geometric primitive. This method shows that TTs have a mean (±SEM) diameter of 356±18nm in rabbit and 169±15nm in mouse (p<0.001). Rabbit TT diameters were more variable than those of mouse (p<0.01) and the smallest TT detected was 41nm in mouse and the largest 695nm in rabbit. These estimates are consistent with TT diameters derived from the more limited sampling of high-pressure frozen samples by electron tomography (which examines only a small fraction of the cell volume). Other measures of TT abundance and geometry (such as volume, membrane fractions and direction) were also derived. On the physiological time scale of E-C coupling (milliseconds), the average TT electrical space constant is ~175μm in rabbit and ~120μm in mouse and is ~50% of the steady-state space constant. This is sufficient to ensure reasonable electrical uniformity across normal cells. The image processing strategy and shape-based 3D approach to feature quantification is also generally applicable to other problems in quantification of sub-cellular anatomy.

Indexed as

Image Processing, Computer-AssistedMicroscopy, ConfocalAnimalsHeart VentriclesMiceMyocytes, CardiacRabbitsSarcoplasmic ReticulumCardiac myocyteConfocal imagingFluorescent dyesGeometryImage processingT-tubules

Identifiers

PMID28483597
PMCPMC5529290
OpenAlexW2611027081

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.