Evidence map›Paper›PMID 28477174›Full record

ArticleArchives of virology2017

Complete cryspovirus genome sequences from Cryptosporidium parvum isolate Iowa.

Minh Vong, Jacob G Ludington, Honorine D Ward, Max L Nibert

Abstract read
In one paragraph

Article in Archives of virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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  5. Review
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  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Minh VongDepartment of Microbiology and Immunobiology, Harvard Medical School, Boston, MA, 02115, USA.
Jacob G LudingtonDivision of Geographic Medicine and Infectious Disease, Tufts Medical Center, Boston, MA, 02116, USA.
Honorine D WardDivision of Geographic Medicine and Infectious Disease, Tufts Medical Center, Boston, MA, 02116, USA. hward@tuftsmedicalcenter.org.
Max L NibertDepartment of Microbiology and Immunobiology, Harvard Medical School, Boston, MA, 02115, USA. mnibert@hms.harvard.edu.

Funding

Training in Molecular, Cellular, and Chemical BiologyT32GM007598 · NIGMS · HARVARD UNIVERSITY · PI DULAC, CATHERINE · 1985 to 2019
$16.2M
MEDICAL SCIENTIST TRAINING PROGRAM AT TUFTS UNIVERSITYT32GM008448 · NIGMS · TUFTS UNIVERSITY BOSTON · PI CHIN, MICHAEL T · 1994 to 2022
$9.1M
MICROSCOPY &IMAGE ANALYSIS OF UNSTAINED MACROMOLECULESR01GM033050 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BAKER, TIMOTHY S · 1985 to 2017
$4.3M
IMMUNOLOGIC ASPECTS OF DISEASET32AI007077 · NIAID · TUFTS UNIVERSITY BOSTON · PI WORTIS, HENRY H. · 1985 to 2017
$3.5M
National Institute of Allergy and Infectious Diseases T32 AI07077NIAID NIH HHS T32 AI007077NIGMS NIH HHS R01 GM033050NIGMS NIH HHS T32 GM007598NIGMS NIH HHS T32 GM008448NIH HHS R01 GM033050
6 · The paper itself

Abstract

Bisegmented dsRNA viruses that infect most or all isolates of apicomplexan parasite Cryptosporidium parvum are currently assigned to a single species, Cryptosporidium parvum virus 1, in genus Cryspovirus, family Partitiviridae. An analysis of existing sequence data suggested that the complete sequences of both cryspovirus genome segments, dsRNA1 and dsRNA2, had yet to be determined. We therefore set out to accomplish this for the virus strain that infects C. parvum isolate Iowa. The results suggest that several previous cryspovirus sequences are indeed truncated at one or both segment termini and also identify sequences at or near the termini that are conserved in both segments. Complete sequences of other cryspovirus strains, including ones from other Cryptosporidium species, are needed for refining their classification into one or more virus species.

Indexed as

Genome, ViralBase SequenceCryptosporidium parvumPhylogenyRNA, ViralRNA VirusesRNA, ViralComplete SequenceCryptosporidiosisCryptosporidium ParvumFelisGenome Segment

Identifiers

PMID28477174
PMCPMC5671912

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.