Evidence map›Paper›PMID 28474855›Full record

ArticleAngewandte Chemie (International ed. in English)2017

Chromatin Regulates Genome Targeting with Cisplatin.

Emmanouil Zacharioudakis, Poonam Agarwal, Alexandra Bartoli, Nathan Abell, Lavaniya Kunalingam, Valérie Bergoglio, Blerta Xhemalce, Kyle M Miller, Raphaël Rodriguez

Open access · hybridAbstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
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  13. Nucleolar Stress Induction by Oxaliplatin and Derivatives.Journal of the American Chemical Society · 2019
    Article
  14. Superresolution imaging of individual replication forks reveals unexpected prodrug resistance mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  15. Article
  16. Chromatin Regulates Genome Targeting with Cisplatin.Angewandte Chemie (International ed. in English) · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Emmanouil ZacharioudakisInstitut Curie, PSL Research University, Chemical Cell Biology Group, 26 Rue d'Ulm, 75248, Paris Cedex 05, France.
Poonam AgarwalDepartment of Molecular Biosciences, Institute of Cellular and Molecular Biology, University of Texas at Austin, 2506 Speedway Stop A5000, Austin, TX, 78712, USA.
Alexandra BartoliInstitut Curie, PSL Research University, Chemical Cell Biology Group, 26 Rue d'Ulm, 75248, Paris Cedex 05, France.
Nathan AbellDepartment of Molecular Biosciences, Institute of Cellular and Molecular Biology, University of Texas at Austin, 2506 Speedway Stop A5000, Austin, TX, 78712, USA.
Lavaniya KunalingamInstitut Curie, PSL Research University, Chemical Cell Biology Group, 26 Rue d'Ulm, 75248, Paris Cedex 05, France.
Valérie BergoglioCRCT, University of Toulouse, INSERM, CNRS, UPS, Avenue Hubert Curien, 31037, Toulouse, France.
Blerta XhemalceDepartment of Molecular Biosciences, Institute of Cellular and Molecular Biology, University of Texas at Austin, 2506 Speedway Stop A5000, Austin, TX, 78712, USA.
Kyle M MillerDepartment of Molecular Biosciences, Institute of Cellular and Molecular Biology, University of Texas at Austin, 2506 Speedway Stop A5000, Austin, TX, 78712, USA.
Raphaël RodriguezInstitut Curie, PSL Research University, Chemical Cell Biology Group, 26 Rue d'Ulm, 75248, Paris Cedex 05, France.ORCID 0000-0001-7668-446X
Centre National de la Recherche Scientifique · FRThe University of Texas at Austin · US

Funding

Shaping DNA Damage Response Networks Via Histone H2A VariantsR01CA198279 · NCI · UNIVERSITY OF TEXAS AT AUSTIN · PI Kyle M Miller · 2016 to 2026
$3.3M
MECHANISMS OF GENOME MAINTENANCE BY BROMODOMAIN CHROMATIN READER PROTEINSR01CA201268 · NCI · UNIVERSITY OF TEXAS AT AUSTIN · PI MILLER, KYLE M · 2016 to 2020
$1.8M
NCI NIH HHS R01 CA198279NCI NIH HHS R01 CA201268
6 · The paper itself

Abstract

Cisplatin derivatives can form various types of DNA lesions (DNA-Pt) and trigger pleiotropic DNA damage responses. Here, we report a strategy to visualize DNA-Pt with high resolution, taking advantage of a novel azide-containing derivative of cisplatin we named APPA, a cellular pre-extraction protocol and the labeling of DNA-Pt by means of click chemistry in cells. Our investigation revealed that pretreating cells with the histone deacetylase (HDAC) inhibitor SAHA led to detectable clusters of DNA-Pt that colocalized with the ubiquitin ligase RAD18 and the replication protein PCNA. Consistent with activation of translesion synthesis (TLS) under these conditions, SAHA and cisplatin cotreatment promoted focal accumulation of the low-fidelity polymerase Polη that also colocalized with PCNA. Remarkably, these cotreatments synergistically triggered mono-ubiquitination of PCNA and apoptosis in a RAD18-dependent manner. Our data provide evidence for a role of chromatin in regulating genome targeting with cisplatin derivatives and associated cellular responses.

Indexed as

Antineoplastic AgentsCell Line, TumorChromatinCisplatinClick ChemistryDNADNA DamageDNA-Directed DNA PolymeraseGenome, HumanHistone Deacetylase InhibitorsHumansMolecular ProbesProliferating Cell Nuclear AntigenUbiquitinationY-Family DNA PolymerasesAntineoplastic AgentsChromatinCisplatinDNADNA-Directed DNA PolymeraseHistone Deacetylase InhibitorsMolecular ProbesProliferating Cell Nuclear AntigenRad30 proteinY-Family DNA Polymerasescancerchromatincisplatinclick chemistryhistone deacetylase

Identifiers

PMID28474855
PMCPMC5488169
OpenAlexW2611963753

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.