ArticleNucleic acids research2017
The EBI search engine: EBI search as a service-making biological data accessible for all.
Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
17 citing papers in PubMed, 1 synthesis or guideline pooled it.
- A harmonized meta-knowledgebase of clinical interpretations of somatic genomic variants in cancer.Nature genetics · 2020Pooled it
- APICURON: a database to credit and acknowledge the work of biocurators.Database : the journal of biological databases and curation · 2021Article
- BioModels Parameters: a treasure trove of parameter values from published systems biology models.Bioinformatics (Oxford, England) · 2020Article
- Community curation of bioinformatics software and data resources.Briefings in bioinformatics · 2020Article
- CD70 Activation Decreases Pulmonary Fibroblast Production of Extracellular Matrix Proteins.American journal of respiratory cell and molecular biology · 2020Article
- Improving Identification ofMolecular & cellular proteomics : MCP · 2020Article
- The bio.tools registry of software tools and data resources for the life sciences.Genome biology · 2019Article
- The EMBL-EBI search and sequence analysis tools APIs in 2019.Nucleic acids research · 2019Article
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- Article
- The European Bioinformatics Institute in 2018: tools, infrastructure and training.Nucleic acids research · 2019Article
- The Pfam protein families database in 2019.Nucleic acids research · 2019Article
- In-silico Design of DNA Oligonucleotides: Challenges and Approaches.Computational and structural biotechnology journal · 2019Review
- Developing computational biology at meridian 23° E, and a little eastwards.Journal of biological research (Thessalonike, Greece) · 2018Article
- HMMER web server: 2018 update.Nucleic acids research · 2018Article
- BioModels: expanding horizons to include more modelling approaches and formats.Nucleic acids research · 2018Article
- EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.Nucleic acids research · 2018Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
5 authors.
Funding
Abstract
We present an update of the EBI Search engine, an easy-to-use fast text search and indexing system with powerful data navigation and retrieval capabilities. The interconnectivity that exists between data resources at EMBL-EBI provides easy, quick and precise navigation and a better understanding of the relationship between different data types that include nucleotide and protein sequences, genes, gene products, proteins, protein domains, protein families, enzymes and macromolecular structures, as well as the life science literature. EBI Search provides a powerful RESTful API that enables its integration into third-party portals, thus providing 'Search as a Service' capabilities, which are the main topic of this article.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.