Evidence map›Paper›PMID 28472342›Full record

ArticleNucleic acids research2017

The non-stop decay mRNA surveillance pathway is required for oxidative stress tolerance.

Nur H Jamar, Paraskevi Kritsiligkou, Chris M Grant

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 58 citations in OpenAlex.

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  12. Ferroptosis and its emerging role in esophageal cancer.Frontiers in molecular biosciences · 2022
    Review
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  14. Mining novelFrontiers in microbiology · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

Nur H JamarThe University of Manchester, Faculty of Biology, Medicine and Health, Manchester M13 9PT, UK.
Paraskevi KritsiligkouThe University of Manchester, Faculty of Biology, Medicine and Health, Manchester M13 9PT, UK.
Chris M GrantThe University of Manchester, Faculty of Biology, Medicine and Health, Manchester M13 9PT, UK.
University of Manchester · GB

Funding

Biotechnology and Biological Sciences Research Council BB/M020770/1
6 · The paper itself

Abstract

Reactive oxygen species (ROS) are toxic by-products of normal aerobic metabolism. ROS can damage mRNAs and the translational apparatus resulting in translational defects and aberrant protein production. Three mRNA quality control systems monitor mRNAs for translational errors: nonsense-mediated decay, non-stop decay (NSD) and no-go decay (NGD) pathways. Here, we show that factors required for the recognition of NSD substrates and components of the SKI complex are required for oxidant tolerance. We found an overlapping requirement for Ski7, which bridges the interaction between the SKI complex and the exosome, and NGD components (Dom34/Hbs1) which have been shown to function in both NSD and NGD. We show that ski7 dom34 and ski7 hbs1 mutants are sensitive to hydrogen peroxide stress and accumulate an NSD substrate. We further show that NSD substrates are generated during ROS exposure as a result of aggregation of the Sup35 translation termination factor, which increases stop codon read-through allowing ribosomes to translate into the 3΄-end of mRNAs. Overexpression of Sup35 decreases stop codon read-through and rescues oxidant tolerance consistent with this model. Our data reveal an unanticipated requirement for the NSD pathway during oxidative stress conditions which prevents the production of aberrant proteins from NSD mRNAs.

Indexed as

Oxidative StressRNA StabilityAdaptation, PhysiologicalAdaptor Proteins, Signal TransducingCell Cycle ProteinsEndoribonucleasesGene Expression Regulation, FungalGTP-Binding ProteinsHSP70 Heat-Shock ProteinsMicrobial ViabilityPeptide Elongation FactorsPeptide Termination FactorsProtein BiosynthesisRNA, FungalRNA, MessengerSaccharomyces cerevisiaeAdaptor Proteins, Signal TransducingCell Cycle ProteinsDom34 protein, S cerevisiaeEndoribonucleasesGTP-Binding ProteinsHBS1 protein, S cerevisiaeHSP70 Heat-Shock ProteinsPeptide Elongation FactorsPeptide Termination FactorsRNA, FungalRNA, MessengerSaccharomyces cerevisiae ProteinsSKI2 protein, S cerevisiaeSKI7 protein, S cerevisiaeSUP35 protein, S cerevisiae

Identifiers

PMID28472342
PMCPMC5499853
OpenAlexW2610719214

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.