Evidence map›Paper›PMID 28472322›Full record

ArticleGenome biology and evolution2017

Genetic Architecture of Natural Variation Underlying Adult Foraging Behavior That Is Essential for Survival of Drosophila melanogaster.

Yuh Chwen G Lee, Qian Yang, Wanhao Chi, Susie A Turkson, Wei A Du, Claus Kemkemer, Zhao-Bang Zeng, Manyuan Long, Xiaoxi Zhuang

Abstract read
In one paragraph

Article in Genome biology and evolution, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yuh Chwen G LeeDepartment of Ecology and Evolution, The University of Chicago, Chicago, IL.
Qian YangDepartment of Neurobiology, The University of Chicago, Chicago, IL.
Wanhao ChiDepartment of Neurobiology, The University of Chicago, Chicago, IL.
Susie A TurksonDepartment of Neurobiology, The University of Chicago, Chicago, IL.
Wei A DuDepartment of Biology, Wayne State University, Detroit, MI.
Claus KemkemerDepartment of Ecology and Evolution, The University of Chicago, Chicago, IL.
Zhao-Bang ZengDepartment of Statistical Genetics and Bioinformatics, North Carolina State University, Raleigh, NC.
Manyuan LongDepartment of Ecology and Evolution, The University of Chicago, Chicago, IL.
Xiaoxi ZhuangDepartment of Neurobiology, The University of Chicago, Chicago, IL.

Funding

Genomic analysis of feeding behavior and fitness in DrosophilaR01GM100768 · NIGMS · UNIVERSITY OF CHICAGO · PI LONG, MANYUAN, ZHUANG, XIAOXI · 2012 to 2015
$1.6M
The evolution of essential biological functions driven by new genes that reshapeF32GM109676 · NIGMS · UNIVERSITY OF CHICAGO · PI LEE, GRACE YUH CHWEN · 2014 to 2015
$106k
NIGMS NIH HHS F32 GM109676NIGMS NIH HHS R01 GM100768
6 · The paper itself

Abstract

Foraging behavior is critical for the fitness of individuals. However, the genetic basis of variation in foraging behavior and the evolutionary forces underlying such natural variation have rarely been investigated. We developed a systematic approach to assay the variation in survival rate in a foraging environment for adult flies derived from a wild Drosophila melanogaster population. Despite being such an essential trait, there is substantial variation of foraging behavior among D. melanogaster strains. Importantly, we provided the first evaluation of the potential caveats of using inbred Drosophila strains to perform genome-wide association studies on life-history traits, and concluded that inbreeding depression is unlikely a major contributor for the observed large variation in adult foraging behavior. We found that adult foraging behavior has a strong genetic component and, unlike larval foraging behavior, depends on multiple loci. Identified candidate genes are enriched in those with high expression in adult heads and, demonstrated by expression knock down assay, are involved in maintaining normal functions of the nervous system. Our study not only identified candidate genes for foraging behavior that is relevant to individual fitness, but also shed light on the initial stage underlying the evolution of the behavior.

Indexed as

Feeding BehaviorGenes, InsectGenetic VariationAnimalsBehavior, AnimalBrainDrosophila melanogasterGenetic Association StudiesGenome, InsectGenome-Wide Association StudyInbreeding DepressionQuantitative Trait LociSurvival RateDrosophila melanogasterforaging behaviorgenome-wide association studyinbreeding depression

Identifiers

PMID28472322
PMCPMC5452641

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.