Evidence map›Paper›PMID 28471311›Full record

ArticleBioengineered2017

A synthetic hybrid promoter for D-xylonate production at low pH in the tolerant yeast Candida glycerinogenes.

Hao Ji, Xinyao Lu, Hong Zong, Bin Zhuge

Open access · goldAbstract read
In one paragraph

Article in Bioengineered, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Recent progress in the microbial production of xylonic acid.World journal of microbiology & biotechnology · 2022
    Review
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Hao Jia The Key Laboratory of Carbohydrate Chemistry and Biotechnology , Ministry of Education, School of Biotechnology, Jiangnan University , Wuxi , China.
Xinyao Lua The Key Laboratory of Carbohydrate Chemistry and Biotechnology , Ministry of Education, School of Biotechnology, Jiangnan University , Wuxi , China.
Hong Zonga The Key Laboratory of Carbohydrate Chemistry and Biotechnology , Ministry of Education, School of Biotechnology, Jiangnan University , Wuxi , China.
Bin Zhugea The Key Laboratory of Carbohydrate Chemistry and Biotechnology , Ministry of Education, School of Biotechnology, Jiangnan University , Wuxi , China.
Jiangnan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The tolerant yeast Candida glycerinogenes, with high D-xylonate and low-pH tolerances, was used as the host for D-xylonate production at low pH in this study. A low-pH inducible promoter, pGUKd, was engineered using the core promoter of the glyceraldehyde-3-phosphate dehydrogenase gene (pGAP) combined with the upstream activating sequence of the promoter of the guanylate kinase gene (pGUK1) that had substituted pH-responsive TF binding sites. The recombinant cells that expressed GFP from the hybrid promoter pGUKd displayed dramatically increased fluorescence intensity at pH 2.5, thus verifying that pGUKd is a low-pH inducible promoter. The promoter pGUKd was then used to express the D-xylose dehydrogenase gene xylB, resulting in increased expression levels of xylB at low pH. The recombinant protein exhibited higher specific activities under lower pH conditions and produced 38 g/l D-xylonate at pH 2.5. This rate is much higher than that produced by fermentation at pH 5.5. These results suggest that the novel hybrid promoter pGUKd functions to direct the production of D-xylonate at low pH, and we provide a candidate genetic tool for the stress tolerant yeast C. glycerinogenes.

Indexed as

Alcohol OxidoreductasesCandidaHydrogen-Ion ConcentrationPromoter Regions, GeneticXyloseAlcohol OxidoreductasesD-xylose dehydrogenaseXyloseCandida glycerinogenes;D-xylonateD-xylose dehydrogenasehybrid promoterlow pH-inducible promoter

Identifiers

PMID28471311
PMCPMC5736338
OpenAlexW2611316326

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.