Evidence map›Paper›PMID 28469732›Full record

ArticleClinical epigenetics2017

The CpG island methylator phenotype is concordant between primary colorectal carcinoma and matched distant metastases.

Stacey A Cohen, Ming Yu, Kelsey Baker, Mary Redman, Chen Wu, Tai J Heinzerling, Ralph M Wirtz, Elpida Charalambous, George Pentheroudakis, Vassiliki Kotoula and 3 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in Clinical epigenetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 2 pooled it
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 2 syntheses or guidelines pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Novel Methylated DNA Markers in the Surveillance of Colorectal Cancer Recurrence.Clinical cancer research : an official journal of the American Association for Cancer Research · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Identification of liver metastasis-associated genes in human colon carcinoma by mRNA profiling.Chinese journal of cancer research = Chung-kuo yen cheng yen chiu · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Stacey A Cohen *Clinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109 USA.
Ming Yu *Clinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109 USA.
Kelsey BakerClinical Statistics, Clinical Research Division, Fred Hutchinson Cancer Center, Seattle, WA USA.
Mary RedmanClinical Statistics, Clinical Research Division, Fred Hutchinson Cancer Center, Seattle, WA USA.
Chen WuClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109 USA.
Tai J HeinzerlingClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109 USA.
Ralph M WirtzSTRATIFYER Molecular Pathology GmbH, Cologne, Germany.
Elpida CharalambousLaboratory of Molecular Oncology, Hellenic Foundation for Cancer Research/Aristotle University of Thessaloniki, Thessaloniki, Greece.
George PentheroudakisDepartment of Medical Oncology, Ioannina University Hospital, Ioannina, Greece.
Vassiliki KotoulaLaboratory of Molecular Oncology, Hellenic Foundation for Cancer Research/Aristotle University of Thessaloniki, Thessaloniki, Greece.
Konstantine T KalogerasLaboratory of Molecular Oncology, Hellenic Foundation for Cancer Research/Aristotle University of Thessaloniki, Thessaloniki, Greece.
George FountzilasLaboratory of Molecular Oncology, Hellenic Foundation for Cancer Research/Aristotle University of Thessaloniki, Thessaloniki, Greece.
William M GradyClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109 USA.
Fred Hutch Cancer Center · USAristotle University of Thessaloniki · GRFairview School District · USUniversity Hospital of Ioannina · GRUniversity of Washington · US

Funding

Tumor mutation signaturesP01CA077852 · NCI · UNIVERSITY OF WASHINGTON · PI SIDOROVA, JULIA · 1999 to 2019
$26.0M
Trans-NetworkU54CA143862 · NCI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI MELDRUM, DEIRDRE R. · 2009 to 2013
$8.4M
Identify and validate novel epigenetic molecular markers for colorectal neoplasmU01CA152756 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GRADY, WILLIAM MALLORY, GUDA, KISHORE · 2010 to 2021
$6.7M
UNIVERSITY OF WASHINGTON GI TRAINING GRANTT32DK007742 · NIDDK · UNIVERSITY OF WASHINGTON · PI GRADY, WILLIAM MALLORY · 1996 to 2022
$4.7M
TGF-beta signaling and colon cancerR01CA115513 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GRADY, WILLIAM MALLORY · 2007 to 2011
$1.6M
NCI NIH HHS P01 CA077852NCI NIH HHS R01 CA115513NCI NIH HHS U01 CA152756NCI NIH HHS U54 CA143862NIDDK NIH HHS T32 DK007742
6 · The paper itself

Abstract

backgroundThe CpG island methylator phenotype (CIMP) in stage III colon cancer (CRC) has been associated with improved survival after treatment with adjuvant irinotecan-based chemotherapy. In this analysis, we determine whether CIMP status in the primary CRC is concordant with the CIMP status of matched metastases in order to determine if assessment of CIMP status in the primary tumor can be used to predict CIMP status of metastatic disease, which is relevant for patient management as well as for understanding the biology of CIMP CRCs.

methodsWe assessed the CIMP status of 70 pairs of primary CRC and matched metastases using a CRC-specific panel of five markers (

resultsSixty-nine of the pairs (98.6%) showed concordant CIMP status in the primary tumor and matched metastasis; five (7.0%) of the pairs were concordantly CIMP positive. Only one pair (1.4%) had divergent CIMP status, demonstrating CIMP positivity (4/5 markers positive) in the primary tumor, while the matched metastasis was CIMP negative (0 markers positive).

conclusionsCIMP status is generally concordant between primary CRCs and matched metastases. Thus, CIMP status in the primary tumor is maintained in matched metastases and can be used to inform CIMP-based therapy options for the metastases.

Indexed as

DNA MethylationAdultAgedBasic Helix-Loop-Helix ProteinsBiomarkers, TumorCalcium Channels, T-TypeColorectal NeoplasmsCore Binding Factor Alpha 3 SubunitCpG IslandsEpigenesis, GeneticFemaleHumansInsulin-Like Growth Factor IIMaleMiddle AgedNeoplasm MetastasisBasic Helix-Loop-Helix ProteinsBiomarkers, TumorCACNA1G protein, humanCalcium Channels, T-TypeCore Binding Factor Alpha 3 SubunitIGF2 protein, humanInsulin-Like Growth Factor IINerve Tissue ProteinsNEUROG1 protein, humanRunx3 protein, humanSOCS1 protein, humanSuppressor of Cytokine Signaling 1 ProteinBiomarkerCIMPColorectal cancerDNA methylationMetastatic

Identifiers

PMID28469732
PMCPMC5414304
OpenAlexW2611325260

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.