Evidence map›Paper›PMID 28469608›Full record

ArticleFrontiers in microbiology2017

Genome-Centric Analysis of a Thermophilic and Cellulolytic Bacterial Consortium Derived from Composting.

Leandro N Lemos, Roberta V Pereira, Ronaldo B Quaggio, Layla F Martins, Livia M S Moura, Amanda R da Silva, Luciana P Antunes, Aline M da Silva, João C Setubal

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Genomic attributes of thermophilic and hyperthermophilic bacteria and archaea.World journal of microbiology & biotechnology · 2022
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. A Review on Bacterial Contribution to Lignocellulose Breakdown into Useful Bio-Products.International journal of environmental research and public health · 2021
    Review
  16. Deconstruction of Lignin: From Enzymes to Microorganisms.Molecules (Basel, Switzerland) · 2021
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Leandro N LemosDepartamento de Bioquímica, Instituto de Química, Universidade de São PauloSão Paulo, Brazil.
Roberta V PereiraDepartamento de Bioquímica, Instituto de Química, Universidade de São PauloSão Paulo, Brazil.
Ronaldo B QuaggioDepartamento de Bioquímica, Instituto de Química, Universidade de São PauloSão Paulo, Brazil.
Layla F MartinsDepartamento de Bioquímica, Instituto de Química, Universidade de São PauloSão Paulo, Brazil.
Livia M S MouraDepartamento de Bioquímica, Instituto de Química, Universidade de São PauloSão Paulo, Brazil.
Amanda R da SilvaDepartamento de Bioquímica, Instituto de Química, Universidade de São PauloSão Paulo, Brazil.
Luciana P AntunesDepartamento de Bioquímica, Instituto de Química, Universidade de São PauloSão Paulo, Brazil.
Aline M da SilvaDepartamento de Bioquímica, Instituto de Química, Universidade de São PauloSão Paulo, Brazil.
João C SetubalDepartamento de Bioquímica, Instituto de Química, Universidade de São PauloSão Paulo, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial consortia selected from complex lignocellulolytic microbial communities are promising alternatives to deconstruct plant waste, since synergistic action of different enzymes is required for full degradation of plant biomass in biorefining applications. Culture enrichment also facilitates the study of interactions among consortium members, and can be a good source of novel microbial species. Here, we used a sample from a plant waste composting operation in the São Paulo Zoo (Brazil) as inoculum to obtain a thermophilic aerobic consortium enriched through multiple passages at 60°C in carboxymethylcellulose as sole carbon source. The microbial community composition of this consortium was investigated by shotgun metagenomics and genome-centric analysis. Six near-complete (over 90%) genomes were reconstructed. Similarity and phylogenetic analyses show that four of these six genomes are novel, with the following hypothesized identifications: a new

Indexed as

bacterial genome reconstructioncellulolyticcompostingconsortiumglycoside hydrolasesmetagenomethermophilic

Identifiers

PMID28469608
PMCPMC5395642

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.