Evidence map›Paper›PMID 28468851›Full record

ArticleJournal of clinical microbiology2017

Whole-Genome Sequencing Reveals the Contribution of Long-Term Carriers in Staphylococcus aureus Outbreak Investigation.

N C Gordon, B Pichon, T Golubchik, D J Wilson, J Paul, D S Blanc, K Cole, J Collins, N Cortes, M Cubbon and 14 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
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  5. Phylodynamic signatures in the emergence of community-associated MRSA.Proceedings of the National Academy of Sciences of the United States of America · 2022
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  10. Whole-genome Sequencing Provides Data for Stratifying Infection Prevention and Control Management of Nosocomial Influenza A.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 11 institutions in 2 countries.

N C GordonNational Institute for Health Research Oxford Biomedical Research Centre, John Radcliffe Hospital, Oxford, United Kingdom ncgordon@doctors.org.uk.
B PichonAntimicrobial Resistance and Healthcare Associated Infections Reference Unit, Public Health England, Colindale, United Kingdom.
T GolubchikNational Institute for Health Research Oxford Biomedical Research Centre, John Radcliffe Hospital, Oxford, United Kingdom.
D J WilsonNational Institute for Health Research Oxford Biomedical Research Centre, John Radcliffe Hospital, Oxford, United Kingdom.
J PaulPublic Health England, Royal Sussex County Hospital, Brighton, United Kingdom.
D S BlancLausanne University Hospital, Service of Preventative Medicine, Lausanne, Switzerland.
K ColePublic Health England, Royal Sussex County Hospital, Brighton, United Kingdom.
J CollinsNewcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle, United Kingdom.
N CortesPortsmouth Hospitals NHS Trust, Portsmouth, United Kingdom.
M CubbonBrighton and Sussex University Hospitals NHS Trust, Brighton, United Kingdom.
F K GouldNewcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle, United Kingdom.
P J JenksPlymouth Hospitals NHS Trust, Plymouth, United Kingdom.
M LlewelynBrighton and Sussex University Hospitals NHS Trust, Brighton, United Kingdom.
J Q NashEast Kent Hospitals NHS Foundation Trust, Canterbury, United Kingdom.
J M OrendiRoyal Stoke University Hospital, University Hospitals of North Midlands NHS Trust, Stoke-on-Trent, United Kingdom.
K ParanthamanPublic Health England, London, United Kingdom.
J R PricePublic Health England, Royal Sussex County Hospital, Brighton, United Kingdom.
L SennLausanne University Hospital, Service of Preventative Medicine, Lausanne, Switzerland.
H L ThomasPublic Health England, London, United Kingdom.
S WylliePortsmouth Hospitals NHS Trust, Portsmouth, United Kingdom.
D W CrookNational Institute for Health Research Oxford Biomedical Research Centre, John Radcliffe Hospital, Oxford, United Kingdom.
T E A PetoNational Institute for Health Research Oxford Biomedical Research Centre, John Radcliffe Hospital, Oxford, United Kingdom.
A S WalkerNational Institute for Health Research Oxford Biomedical Research Centre, John Radcliffe Hospital, Oxford, United Kingdom.
A M KearnsAntimicrobial Resistance and Healthcare Associated Infections Reference Unit, Public Health England, Colindale, United Kingdom.
National Institute for Health Research · GBPublic Health England · GBRoyal Sussex County Hospital · GBNewcastle upon Tyne Hospitals NHS Foundation Trust · GBPortsmouth Hospitals NHS Trust · GBUniversity Hospitals Sussex NHS Foundation Trust · GBUniversity of Lausanne · CHUniversity of Oxford · GBEast Kent Hospitals University NHS Foundation Trust · GBRoyal Stoke University Hospital · GBUniversity Hospitals Plymouth NHS Trust · GB

Funding

Department of Health [UK] HICF-T5-358Medical Research Council MR/K023985/1Wellcome TrustWellcome Trust WT098615/Z/12/Z
6 · The paper itself

Abstract

Whole-genome sequencing (WGS) makes it possible to determine the relatedness of bacterial isolates at a high resolution, thereby helping to characterize outbreaks. However, for

Indexed as

Disease OutbreaksMolecular TypingWhole Genome SequencingAdultCarrier StateElectrophoresis, Gel, Pulsed-FieldGenotypeHumansMicrobial Sensitivity TestsPhylogenyStaphylococcal InfectionsStaphylococcus aureusMRSAoutbreaksStaphylococcus aureuswhole-genome sequencing

Identifiers

PMID28468851
PMCPMC5483921
OpenAlexW2610253859

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.