Evidence map›Paper›PMID 28468604›Full record

ArticleBMC microbiology2017

Simultaneous detection of chikungunya virus, dengue virus and human pathogenic Leptospira genomes using a multiplex TaqMan® assay.

Claude Giry, Bénédicte Roquebert, Ghislaine Li-Pat-Yuen, Philippe Gasque, Marie-Christine Jaffar-Bandjee

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Observational
  6. Laboratory Diagnosis of Leptospirosis.Methods in molecular biology (Clifton, N.J.) · 2026
    Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Integrated Arbovirus Surveillance Improves the Detection Onset of Zika Virus in Panama.The American journal of tropical medicine and hygiene · 2020
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Claude GiryCentre National Arbovirus Associé, CHU de la Réunion-Site Nord, Saint-Denis, Réunion, France. claude.giry@chu-reunion.fr.ORCID 0000-0002-4286-0063
Bénédicte RoquebertCentre National Arbovirus Associé, CHU de la Réunion-Site Nord, Saint-Denis, Réunion, France.
Ghislaine Li-Pat-YuenCentre National Arbovirus Associé, CHU de la Réunion-Site Nord, Saint-Denis, Réunion, France.
Philippe GasqueLaboratoire d'immunologie clinique et expérimentale ZOI (LICE-OI), CHU de la Réunion-Site Nord, Saint-Denis, Réunion, France.
Marie-Christine Jaffar-BandjeeCentre National Arbovirus Associé, CHU de la Réunion-Site Nord, Saint-Denis, Réunion, France.
Centre National de la Recherche Scientifique · FRCentre Hospitalier Universitaire de La Réunion · FRUniversity of Reunion Island · RE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn 2005-2006 a major epidemics of Chikungunya disease occurred in South-West Indian Ocean islands. In Reunion Island, the magnitude of Chikungunya infection related symptoms was high and with over 38% of serological prevalence in the population. This epidemics illustrated the potential threat of emerging arboviral diseases for inhabitants of Reunion Island and elsewhere since vectors are worldwide distributed. A sentinel surveillance network was set-up to detect emerging pathogens associated with fever over 38 °C and in the absence of known etiologic causes. Leptospirosis is caused by a pathogenic spirochete of the Leptospira genus and is an endemic and recurrent seasonal disease of great concern in Reunion Island. To accurately diagnose potentially infected patients and to advise Health authorities on the presence of emerging pathogens, a rapid diagnostic test was needed that could differentiate between these 3 pathogens.

methodsA one-step multiplex real-time PCR assay was developed that can simultaneously detect RNA of Chikungunya and Dengue viruses and leptospiral DNA with good performance for a routine diagnostic use.

resultsSimplex protocols already published were used with key modifications to implement a triplex assay which was set-up with a small reaction volume to improve cost efficiency.

conclusionsThis approach has enabled greater diagnostic capacity in our laboratory. We established a multiplex approach validated and valuable for cost savings, and with the concurrent detection of 3 pathogens of public health concern.

Indexed as

Chikungunya FeverChikungunya virusDengueDengue VirusDNA, BacterialGenome, BacterialGenome, ViralHumansLeptospiraLeptospirosisMultiplex Polymerase Chain ReactionPathology, MolecularRNA, ViralSensitivity and SpecificitySequence AlignmentDNA, BacterialRNA, ViralChikungunyaDengueLeptospiraMultiplex real-time RT-PCR

Identifiers

PMID28468604
PMCPMC5415735
OpenAlexW2611667124

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.