Evidence map›Paper›PMID 28465594›Full record

ArticleScientific reports2017

Crowding-facilitated macromolecular transport in attractive micropost arrays.

Fan-Tso Chien, Po-Keng Lin, Wei Chien, Cheng-Hsiang Hung, Ming-Hung Yu, Chia-Fu Chou, Yeng-Long Chen

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Fan-Tso ChienInstitute of Physics, Academia Sinica, Taipei, Taiwan, ROC.
Po-Keng LinInstitute of Physics, Academia Sinica, Taipei, Taiwan, ROC.
Wei ChienInstitute of Physics, Academia Sinica, Taipei, Taiwan, ROC.
Cheng-Hsiang HungDepartment of Physics, National Taiwan University, Taipei, Taiwan, ROC.
Ming-Hung YuInstitute of Physics, Academia Sinica, Taipei, Taiwan, ROC.
Chia-Fu ChouInstitute of Physics, Academia Sinica, Taipei, Taiwan, ROC.ORCID http://orcid.org/0000-0003-0070-5556
Yeng-Long ChenInstitute of Physics, Academia Sinica, Taipei, Taiwan, ROC. yenglong@phys.sinica.edu.tw.ORCID http://orcid.org/0000-0002-3849-0899

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Our study of DNA dynamics in weakly attractive nanofabricated post arrays revealed crowding enhances polymer transport, contrary to hindered transport in repulsive medium. The coupling of DNA diffusion and adsorption to the microposts results in more frequent cross-post hopping and increased long-term diffusivity with increased crowding density. We performed Langevin dynamics simulations and found maximum long-term diffusivity in post arrays with gap sizes comparable to the polymer radius of gyration. We found that macromolecular transport in weakly attractive post arrays is faster than in non-attractive dense medium. Furthermore, we employed hidden Markov analysis to determine the transition of macromolecular adsorption-desorption on posts and hopping between posts. The apparent free energy barriers are comparable to theoretical estimates determined from polymer conformational fluctuations.

Identifiers

PMID28465594
PMCPMC5430964

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.