Evidence map›Paper›PMID 28464824›Full record

ArticleBMC genomics2017

Growth and stress response mechanisms underlying post-feeding regenerative organ growth in the Burmese python.

Audra L Andrew, Blair W Perry, Daren C Card, Drew R Schield, Robert P Ruggiero, Suzanne E McGaugh, Amit Choudhary, Stephen M Secor, Todd A Castoe

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
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  3. Python cardiomyocytes store lipids to buffer against hyperlipidemia.Annals of the New York Academy of Sciences · 2025
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  4. Harnessing Evolution and Biomimetics to Enhance Planetary Health: Kidney Insights.Journal of the American Society of Nephrology : JASN · 2025
    Review
  5. Article
  6. Review
  7. Postprandial cardiac hypertrophy is sustained by mechanics, epigenetic, and metabolic reprogramming in pythons.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. HyperpolarizedMagnetic resonance in medicine · 2022
    Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Review
  18. Article
  19. Genome mapping of aProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Audra L AndrewDepartment of Biology, The University of Texas Arlington, 501 S. Nedderman Dr, Arlington, TX, 76019, USA.
Blair W PerryDepartment of Biology, The University of Texas Arlington, 501 S. Nedderman Dr, Arlington, TX, 76019, USA.
Daren C CardDepartment of Biology, The University of Texas Arlington, 501 S. Nedderman Dr, Arlington, TX, 76019, USA.
Drew R SchieldDepartment of Biology, The University of Texas Arlington, 501 S. Nedderman Dr, Arlington, TX, 76019, USA.
Robert P RuggieroDepartment of Biology, New York University Abu Dhabi, Saadiyat Island, Abu Dhabi, United Arab Emirates.
Suzanne E McGaughDepartment of Ecology, Evolution, and Behavior, University of Minnesota, St. Paul, MN, 55108, USA.
Amit ChoudharyHarvard Medical School, Renal Division, Brigham and Woman's Hospital, Cambridge, MA, 02142, USA.
Stephen M SecorDepartment of Biological Sciences, University of Alabama, Tuscaloosa, AL, 35487, Box 870344, USA.
Todd A CastoeDepartment of Biology, The University of Texas Arlington, 501 S. Nedderman Dr, Arlington, TX, 76019, USA. todd.castoe@uta.edu.
The University of Texas at Arlington · USHarvard University · USNew York University Abu Dhabi · AEUniversity of Alabama · USUniversity of Minnesota · US

Funding

Leveraging snakes' extreme physiology to modulate human beta-cell functionR01DK113597 · NIDDK · BROAD INSTITUTE, INC. · PI CHOUDHARY, AMIT, SECOR, STEPHEN M · 2016 to 2020
$2.5M
NIDDK NIH HHS R01 DK113597
6 · The paper itself

Abstract

backgroundPrevious studies examining post-feeding organ regeneration in the Burmese python (Python molurus bivittatus) have identified thousands of genes that are significantly differentially regulated during this process. However, substantial gaps remain in our understanding of coherent mechanisms and specific growth pathways that underlie these rapid and extensive shifts in organ form and function. Here we addressed these gaps by comparing gene expression in the Burmese python heart, liver, kidney, and small intestine across pre- and post-feeding time points (fasted, one day post-feeding, and four days post-feeding), and by conducting detailed analyses of molecular pathways and predictions of upstream regulatory molecules across these organ systems.

resultsIdentified enriched canonical pathways and upstream regulators indicate that while downstream transcriptional responses are fairly tissue specific, a suite of core pathways and upstream regulator molecules are shared among responsive tissues. Pathways such as mTOR signaling, PPAR/LXR/RXR signaling, and NRF2-mediated oxidative stress response are significantly differentially regulated in multiple tissues, indicative of cell growth and proliferation along with coordinated cell-protective stress responses. Upstream regulatory molecule analyses identify multiple growth factors, kinase receptors, and transmembrane receptors, both within individual organs and across separate tissues. Downstream transcription factors MYC and SREBF are induced in all tissues.

conclusionsThese results suggest that largely divergent patterns of post-feeding gene regulation across tissues are mediated by a core set of higher-level signaling molecules. Consistent enrichment of the NRF2-mediated oxidative stress response indicates this pathway may be particularly important in mediating cellular stress during such extreme regenerative growth.

Indexed as

EatingRegenerationStress, PhysiologicalAnimalsBoidaeGene Expression ProfilingNF-E2-Related Factor 2Organ SpecificitySignal TransductionTOR Serine-Threonine KinasesNF-E2-Related Factor 2TOR Serine-Threonine KinasesHyperplasiaHypertrophymTORNRF2RegenerationRNAseq

Identifiers

PMID28464824
PMCPMC5412052
OpenAlexW2611918999

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.