Evidence map›Paper›PMID 28464795›Full record

ArticleBMC genomics2017

Evolutionary history of glucose-6-phosphatase encoding genes in vertebrate lineages: towards a better understanding of the functions of multiple duplicates.

Lucie Marandel, Stéphane Panserat, Elisabeth Plagnes-Juan, Eva Arbenoits, José Luis Soengas, Julien Bobe

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Lucie MarandelINRA, UPPA, UMR 1419 Nutrition, Metabolism, Aquaculture, F-64310, Saint Pée sur Nivelle, France. lucie.marandel@inra.fr.ORCID 0000-0001-9395-6041
Stéphane PanseratINRA, UPPA, UMR 1419 Nutrition, Metabolism, Aquaculture, F-64310, Saint Pée sur Nivelle, France.
Elisabeth Plagnes-JuanINRA, UPPA, UMR 1419 Nutrition, Metabolism, Aquaculture, F-64310, Saint Pée sur Nivelle, France.
Eva ArbenoitsINRA, UPPA, UMR 1419 Nutrition, Metabolism, Aquaculture, F-64310, Saint Pée sur Nivelle, France.
José Luis SoengasDepartamento de Bioloxía Funcional e Ciencias da Saúde, Laboratorio de Fisioloxía Animal, Facultade de Bioloxía, Universidade de Vigo, E-36310, Vigo, Spain.
Julien BobeINRA, UR1037 LPGP, Campus de Beaulieu, F-35000, Rennes, France.
Nutrition Metabolism Aquaculture · FRLaboratoire de Physiologie et Génomique des Poissons · FRUniversidade de Vigo · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGlucose-6-phosphate (G6pc) is a key enzyme involved in the regulation of the glucose homeostasis. The present study aims at revisiting and clarifying the evolutionary history of g6pc genes in vertebrates.

resultsg6pc duplications happened by successive rounds of whole genome duplication that occurred during vertebrate evolution. g6pc duplicated before or around Osteichthyes/Chondrichthyes radiation, giving rise to g6pca and g6pcb as a consequence of the second vertebrate whole genome duplication. g6pca was lost after this duplication in Sarcopterygii whereas both g6pca and g6pcb then duplicated as a consequence of the teleost-specific whole genome duplication. One g6pca duplicate was lost after this duplication in teleosts. Similarly one g6pcb2 duplicate was lost at least in the ancestor of percomorpha. The analysis of the evolution of spatial expression patterns of g6pc genes in vertebrates showed that all g6pc were mainly expressed in intestine and liver whereas teleost-specific g6pcb2 genes were mainly and surprisingly expressed in brain and heart. g6pcb2b, one gene previously hypothesised to be involved in the glucose intolerant phenotype in trout, was unexpectedly up-regulated (as it was in liver) by carbohydrates in trout telencephalon without showing significant changes in other brain regions. This up-regulation is in striking contrast with expected glucosensing mechanisms suggesting that its positive response to glucose relates to specific unknown processes in this brain area.

conclusionsOur results suggested that the fixation and the divergence of g6pc duplicated genes during vertebrates' evolution may lead to adaptive novelty and probably to the emergence of novel phenotypes related to glucose homeostasis.

Indexed as

Evolution, MolecularAnimalsBrainDietary CarbohydratesGene Expression Regulation, EnzymologicGlucose-6-PhosphataseHeartHumansMyocardiumPhylogenySyntenyVertebratesDietary CarbohydratesGlucose-6-PhosphataseActinopterygiibrainDuplicated genesglucoseSarcopterygiiTeleoststrout

Identifiers

PMID28464795
PMCPMC5414149
OpenAlexW2610983969

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.