Evidence map›Paper›PMID 28463973›Full record

ArticlePloS one2017

Helicobacter pylori strains from a Nigerian cohort show divergent antibiotic resistance rates and a uniform pathogenicity profile.

Ute Harrison, Muinah A Fowora, Abiodun T Seriki, Eva Loell, Susanna Mueller, Margaret Ugo-Ijeh, Charles A Onyekwere, Olufunmilayo A Lesi, Jesse A Otegbayo, Adegboyega Akere and 10 more

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Prevalence of primaryGut microbes · 2026
    Review
  4. Predictors of Resistance in PediatricPathogens (Basel, Switzerland) · 2026
    Article
  5. Pathogens (Basel, Switzerland) · 2023
    Article
  6. Review
  7. Article
  8. Genetic Diversity ofAdvanced biomedical research · 2022
    Article
  9. The Pan African medical journal · 2022
    Article
  10. Review
  11. Article
  12. Discovery of unique AfricanWorld journal of gastroenterology · 2020
    Article
  13. Article
  14. Article
  15. Primary Resistance Pattern ofInfection and drug resistance · 2020
    Review
  16. Infections withWorld journal of gastroenterology · 2019
    Review
  17. Article
  18. BioMed research international · 2019
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Ute HarrisonMax von Pettenkofer-Institut für Hygiene und Medizinische Mikrobiologie, Ludwig-Maximilians-Universität, Munich, Germany.
Muinah A FoworaMolecular Biology and Biotechnology division, Nigerian Institute of Medical Research, Yaba, Lagos, Nigeria.
Abiodun T SerikiDepartment of Microbiology, University of Lagos, Lagos, Nigeria.
Eva LoellMax von Pettenkofer-Institut für Hygiene und Medizinische Mikrobiologie, Ludwig-Maximilians-Universität, Munich, Germany.
Susanna MuellerPathologisches Institut, Ludwig-Maximilians-Universität, Munich, Germany.
Margaret Ugo-IjehMolecular Biology and Biotechnology division, Nigerian Institute of Medical Research, Yaba, Lagos, Nigeria.
Charles A OnyekwereLagos State University Teaching Hospital, Lagos, Nigeria.
Olufunmilayo A LesiCollege of Medicine University of Lagos, Lagos, Nigeria.
Jesse A OtegbayoUniversity College Hospital, Ibadan, Nigeria.
Adegboyega AkereUniversity College Hospital, Ibadan, Nigeria.
Dennis A NdububaDepartment of Medicine, Obafemi Awolowo University, Ile-Ife, Nigeria.
Olusegun AdekanleDepartment of Medicine, Obafemi Awolowo University, Ile-Ife, Nigeria.
Ebere AnomnezeHealth Gate Clinics, Ojuelegba Road, Lagos, Nigeria.
Fatimah B AbdulkareemCollege of Medicine University of Lagos, Lagos, Nigeria.
Isaac A AdeleyeDepartment of Microbiology, University of Lagos, Lagos, Nigeria.
Alexander CrispinInstitut für medizinische Informationsverarbeitung, Biometrie und Epidemiologie, Munich, Germany.
Gabriele RiederBavarian Health and Food Safety Authority, Oberschleißheim, Germany.
Wolfgang FischerMax von Pettenkofer-Institut für Hygiene und Medizinische Mikrobiologie, Ludwig-Maximilians-Universität, Munich, Germany.
Stella I SmithMolecular Biology and Biotechnology division, Nigerian Institute of Medical Research, Yaba, Lagos, Nigeria.
Rainer HaasMax von Pettenkofer-Institut für Hygiene und Medizinische Mikrobiologie, Ludwig-Maximilians-Universität, Munich, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antibiotic resistance in Helicobacter pylori is a factor preventing its successful eradication. Particularly in developing countries, resistance against commonly used antibiotics is widespread. Here, we present an epidemiological study from Nigeria with 111 isolates. We analyzed the associated disease outcome, and performed a detailed characterization of these isolated strains with respect to their antibiotic susceptibility and their virulence characteristics. Furthermore, statistical analysis was performed on microbiological data as well as patient information and the results of the gastroenterological examination. We found that the variability concerning the production of virulence factors between strains was minimal, with 96.4% of isolates being CagA-positive and 92.8% producing detectable VacA levels. In addition, high frequency of bacterial resistance was observed for metronidazole (99.1%), followed by amoxicillin (33.3%), clarithromycin (14.4%) and tetracycline (4.5%). In conclusion, this study indicated that the infection rate of H. pylori infection within the cohort in the present study was surprisingly low (36.6%). Furthermore, an average gastric pathology was observed by histological grading and bacterial isolates showed a uniform pathogenicity profile while indicating divergent antibiotic resistance rates.

Indexed as

AdolescentAdultAgedAged, 80 and overAnti-Bacterial AgentsAntigens, BacterialBacterial ProteinsBlotting, WesternChildChild, PreschoolDrug Resistance, BacterialFemaleHelicobacter InfectionsHelicobacter pyloriHumansInfantAnti-Bacterial AgentsAntigens, BacterialBacterial ProteinscagA protein, Helicobacter pyloriUrease

Identifiers

PMID28463973
PMCPMC5413034

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.