Evidence map›Paper›PMID 28462382›Full record

ArticleCellular and molecular gastroenterology and hepatology2017

GATA4 Is Sufficient to Establish Jejunal Versus Ileal Identity in the Small Intestine.

Cayla A Thompson, Kevin Wojta, Kirthi Pulakanti, Sridhar Rao, Paul Dawson, Michele A Battle

Open access · goldAbstract read
In one paragraph

Article in Cellular and molecular gastroenterology and hepatology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 53 citations in OpenAlex.

  1. Regional organization of nutrient absorption across the small intestine.Nature reviews. Gastroenterology & hepatology · 2026
    Review
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  13. Fibroblast growth factor 19 secretion and function in perinatal development.American journal of physiology. Gastrointestinal and liver physiology · 2023
    Review
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Cayla A ThompsonDepartment of Cell Biology, Neurobiology and Anatomy, Medical College of Wisconsin, Milwaukee, Wisconsin.
Kevin WojtaDepartment of Cell Biology, Neurobiology and Anatomy, Medical College of Wisconsin, Milwaukee, Wisconsin.
Kirthi PulakantiBlood Research Institute, Blood Center of Wisconsin, Milwaukee, Wisconsin.
Sridhar RaoDepartment of Cell Biology, Neurobiology and Anatomy, Medical College of Wisconsin, Milwaukee, Wisconsin.
Paul DawsonDepartment of Pediatrics, Emory University, Atlanta, Georgia.
Michele A BattleDepartment of Cell Biology, Neurobiology and Anatomy, Medical College of Wisconsin, Milwaukee, Wisconsin.
Medical College of Wisconsin · USEmory University · USVersiti Blood Center of Wisconsin · US

Funding

ILEAL BILE ACID TRANSPORTER METABOLISM AND REGULATIONR01DK047987 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI DAWSON, PAUL A · 2000 to 2021
$6.8M
Cohesin Mutations in Acute Myelogenous LeukemiaR01CA204231 · NCI · VERSITI WISCONSIN, INC. · PI RAO, SRIDHAR · 2017 to 2021
$1.9M
Determining the Mechanisms Regulating Functional Regionalization of the IntestineR01DK087873 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI BATTLE, MICHELE A · 2010 to 2015
$1.7M
Determining the mechanisms regulating functional regionalization of the intestineR56DK087873 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI BATTLE, MICHELE A · 2016 to 2016
$128k
ILEAL BILE ACID TRANSPORTER METABOLISM AND REGULATIONR29DK047987 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI DAWSON, PAUL A · 1994 to 1998
–
NCI NIH HHS R01 CA204231NIDDK NIH HHS R01 DK047987NIDDK NIH HHS R01 DK087873NIDDK NIH HHS R29 DK047987NIDDK NIH HHS R56 DK087873
6 · The paper itself

Abstract

BACKGROUND &

aimsPatterning of the small intestinal epithelium along its cephalocaudal axis establishes three functionally distinct regions: duodenum, jejunum, and ileum. Efficient nutrient assimilation and growth depend on the proper spatial patterning of specialized digestive and absorptive functions performed by duodenal, jejunal, and ileal enterocytes. When enterocyte function is disrupted by disease or injury, intestinal failure can occur. One approach to alleviate intestinal failure would be to restore lost enterocyte functions. The molecular mechanisms determining regionally defined enterocyte functions, however, are poorly delineated. We previously showed that GATA binding protein 4 (GATA4) is essential to define jejunal enterocytes. The goal of this study was to test the hypothesis that GATA4 is sufficient to confer jejunal identity within the intestinal epithelium.

methodsTo test this hypothesis, we generated a novel

resultsWe found that GATA4-expressing ileum lost ileal identity. The global gene expression profile of GATA4-expressing ileal epithelium aligned more closely with jejunum and duodenum rather than ileum. Focusing on jejunal vs ileal identity, we defined sets of jejunal and ileal genes likely to be regulated directly by GATA4 to suppress ileal identity and promote jejunal identity. Furthermore, our study implicates GATA4 as a transcriptional repressor of

conclusionsOverall, this study refines our understanding of an important GATA4-dependent molecular mechanism to pattern the intestinal epithelium along its cephalocaudal axis by elaborating on GATA4's function as a crucial dominant molecular determinant of jejunal enterocyte identity. Microarray data from this study have been deposited into NCBI Gene Expression Omnibus (http://www.ncbi.nlm.nih.gov/geo) and are accessible through GEO series accession number GSE75870.

Indexed as

bio-ChIP-seq, biotin-mediated chromatin immunoprecipitation with high-throughput sequencingbp, base paircDNA, complementary DNAcKI, conditional knock-incKO, conditional knockoutCyp7a1, cytochrome P450 family 7 subfamily A member 1dATP, deoxyadenosine triphosphateE, embryonic dayEMSA, electrophoretic mobility shift assayEnterohepatic SignalingFabp6, fatty acid binding protein 6Fgf15Fgf, fibroblast growth factorFXRFXR, farnesoid X receptorJejunal Identitylnl, loxP-flanked PGK-Neo-3xSV40 polyadenylation sequencemRNA, messenger RNAOSTα/β, organic solute transporter α/βpA, polyadenylationPCR, polymerase chain reactionqRT, quantitative reverse-transcriptionSBS, short-bowel syndromeSlc, solute carrierTranscriptional RegulationTSS, transcription start sitexiFABP, Xenopus I-FABP

Identifiers

PMID28462382
PMCPMC5404030
OpenAlexW2580349738

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.