Evidence map›Paper›PMID 28461238›Full record

ArticleDevelopmental biology2017

Functional analysis of microRNA pathway genes in the somatic gonad and germ cells during ovulation in C. elegans.

Carmela Rios, David Warren, Benjamin Olson, Allison L Abbott

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

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  9. The multifaceted roles of microRNAs in differentiation.Current opinion in cell biology · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Carmela RiosDepartment of Biological Sciences, Marquette University, Milwaukee, WI 53201, United States.
David WarrenDepartment of Biological Sciences, Marquette University, Milwaukee, WI 53201, United States.
Benjamin OlsonDepartment of Biological Sciences, Marquette University, Milwaukee, WI 53201, United States.
Allison L AbbottDepartment of Biological Sciences, Marquette University, Milwaukee, WI 53201, United States. Electronic address: allison.abbott@marquette.edu.
Marquette University · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Genetic Analysis of Conserved microRNAs in C. elegansR15GM084451 · NIGMS · MARQUETTE UNIVERSITY · PI ABBOTT, ALLISON LYNN · 2008 to 2014
$868k
NIGMS NIH HHS R15 GM084451NIH HHS P40 OD010440
6 · The paper itself

Abstract

MicroRNAs (miRNAs) are post-transcriptional regulators of gene expression that play critical roles in animal development and physiology, though functions for most miRNAs remain unknown. Worms with reduced miRNA biogenesis due to loss of Drosha or Pasha/DGCR8 activity are sterile and fail to ovulate, indicating that miRNAs are required for the process of oocyte maturation and ovulation. Starting with this penetrant sterile phenotype and using new strains created to perform tissue specific RNAi, we characterized the roles of the C. elegans Pasha, pash-1, and two miRNA-specific Argonautes, alg-1 and alg-2, in somatic gonad cells and in germ cells in the regulation of ovulation. Conditional loss of pash-1 activity resulted in a reduced rate of ovulation and in basal and ovulatory sheath contractions. Similarly, knockdown of miRNA-specific Argonautes in the cells of the somatic gonad by tissue-specific RNAi results in a reduction of the ovulation rate and in basal and ovulatory sheath contractions. Reduced miRNA pathway gene activity resulted in a range of defects, including oocytes that were pinched upon entry of the oocyte into the distal end of the spermatheca in about 42% of the ovulation events observed following alg-1 RNAi. This phenotype was not observed on worms exposed to control RNAi. In contrast, knockdown of alg-1 and alg-2 in germ cells results in few defects in oocyte maturation and ovulation. These data identify specific steps in the process of ovulation that require miRNA pathway gene activity in the somatic gonad cells.

Indexed as

AnimalsArgonaute ProteinsCaenorhabditis elegansCaenorhabditis elegans ProteinsCell DifferentiationGerm CellsGonadsMicroRNAsOvulationRibonuclease IIIRNA-Binding ProteinsRNA InterferenceRNA, Small InterferingALG-1 protein, C elegansALG-2 protein, C elegansArgonaute ProteinsCaenorhabditis elegans Proteinsdrsh-1 protein, C elegansMicroRNAsRibonuclease IIIRNA-Binding ProteinsRNA, Small InterferingC. elegansGerm cellsMicroRNAOvulationSomatic gonad

Identifiers

PMID28461238
PMCPMC5716346
OpenAlexW2609802522

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.