Evidence map›Paper›PMID 28457866›Full record

ArticleCurrent biology : CB2017

Rapid Rates of Pol II Elongation in the Drosophila Embryo.

Takashi Fukaya, Bomyi Lim, Michael Levine

Open access · bronzeAbstract read
In one paragraph

Article in Current biology : CB, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 101 citations in OpenAlex.

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  7. Quantifying Transcription Factor Enrichment at Target Loci in Live Embryos.Methods in molecular biology (Clifton, N.J.) · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Takashi FukayaLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA. Electronic address: tfukaya@princeton.edu.
Bomyi LimLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA.
Michael LevineLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544, USA; Department of Molecular Biology, Princeton University, Princeton, NJ 08544, USA. Electronic address: msl2@princeton.edu.
Princeton University · US

Funding

Visualization of gene activity in the Drosophila embryoR35GM118147 · NIGMS · PRINCETON UNIVERSITY · PI Michael Steven Levine · 2016 to 2026
$6.7M
SPATIAL REALMS OF HOMEOTIC GENE EXPRESSION IN DROSOPHILAR01GM034431 · NIGMS · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI LEVINE, MICHAEL STEVEN · 1985 to 2016
$4.4M
Imaging chromosome dynamics and measuring its impact on transcriptional activityU01EB021239 · NIBIB · PRINCETON UNIVERSITY · PI GREGOR, THOMAS, LEVINE, MICHAEL STEVEN · 2015 to 2017
$1.1M
Imaging chromosome dynamics and measuring its impact on transcriptional activityU01DA047730 · NIDA · PRINCETON UNIVERSITY · PI GREGOR, THOMAS, LEVINE, MICHAEL STEVEN · 2018 to 2019
$740k
Regulation of transcriptional bursting in the Drosophila embryoF32GM122186 · NIGMS · PRINCETON UNIVERSITY · PI LIM, BOMYI · 2017 to 2018
$62k
NIBIB NIH HHS U01 EB021239NIDA NIH HHS U01 DA047730NIGMS NIH HHS F32 GM122186NIGMS NIH HHS R01 GM034431NIGMS NIH HHS R35 GM118147
6 · The paper itself

Abstract

Elongation of RNA polymerase II (Pol II) is thought to be an important mechanism for regulating gene expression [1]. We measured the first wave of de novo transcription in living Drosophila embryos using dual-fluorescence detection of nascent transcripts containing 5' MS2 and 3' PP7 RNA stem loops. Pol II elongation rates of 2.4-3.0 kb/min were observed, approximately twice as fast as earlier estimates [2-6]. The revised rates permit substantial levels of zygotic gene activity prior to the mid-blastula transition. We also provide evidence that variable rates of elongation are not a significant source of differential gene activity, suggesting that transcription initiation and Pol II release are the key determinants of gene control in development.

Indexed as

Gene Expression RegulationTranscription Elongation, GeneticAnimalsDrosophilaDrosophila ProteinsEmbryo, NonmammalianFemaleMalePromoter Regions, GeneticRNA Polymerase IITranscription Initiation, GeneticDrosophila ProteinsRNA Polymerase IIDrosophila embryolive imagingPol II elongationtranscription

Identifiers

PMID28457866
PMCPMC5665007
OpenAlexW2608376949

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.