Evidence map›Paper›PMID 28455526›Full record

ArticleScientific reports2017

Genome editing in the mushroom-forming basidiomycete Coprinopsis cinerea, optimized by a high-throughput transformation system.

Shigeo S Sugano, Hiroko Suzuki, Eisuke Shimokita, Hirofumi Chiba, Sumihare Noji, Yuriko Osakabe, Keishi Osakabe

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 116 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Gene Editing inJournal of fungi (Basel, Switzerland) · 2025
    Review
  7. Article
  8. Review
  9. Review
  10. Mycoscience · 2025
    Article
  11. Towards engineering agaricomycete fungi for terpenoid production.Journal of industrial microbiology & biotechnology · 2024
    Review
  12. Article
  13. Article
  14. Effect of a Mating Type Gene Editing inJournal of fungi (Basel, Switzerland) · 2024
    Article
  15. Advancements in genetic studies of mushrooms: a comprehensive review.World journal of microbiology & biotechnology · 2024
    Review
  16. Review
  17. Review
  18. Review
  19. Article
  20. Structural Analysis of theJournal of fungi (Basel, Switzerland) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Shigeo S SuganoCenter for Collaboration among Agriculture, Industry, and Commerce, Tokushima University, Tokushima, Japan.
Hiroko SuzukiCenter for Collaboration among Agriculture, Industry, and Commerce, Tokushima University, Tokushima, Japan.
Eisuke ShimokitaCenter for Collaboration among Agriculture, Industry, and Commerce, Tokushima University, Tokushima, Japan.
Hirofumi ChibaCenter for Collaboration among Agriculture, Industry, and Commerce, Tokushima University, Tokushima, Japan.
Sumihare NojiCenter for Collaboration among Agriculture, Industry, and Commerce, Tokushima University, Tokushima, Japan.
Yuriko OsakabeCenter for Collaboration among Agriculture, Industry, and Commerce, Tokushima University, Tokushima, Japan.
Keishi OsakabeCenter for Collaboration among Agriculture, Industry, and Commerce, Tokushima University, Tokushima, Japan. kosakabe@tokushima-u.ac.jp.ORCID http://orcid.org/0000-0002-6227-6913
Tokushima University · JPTokushima Prefectural General Education Center · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mushroom-forming basidiomycetes produce a wide range of metabolites and have great value not only as food but also as an important global natural resource. Here, we demonstrate CRISPR/Cas9-based genome editing in the model species Coprinopsis cinerea. Using a high-throughput reporter assay with cryopreserved protoplasts, we identified a novel promoter, CcDED1

Indexed as

Genome, FungalTransformation, GeneticAgaricalesCRISPR-Cas SystemsGene EditingGene ExpressionGenes, ReporterGreen Fluorescent ProteinsPromoter Regions, GeneticProtoplastsRecombination, GeneticStaining and LabelingGreen Fluorescent Proteins

Identifiers

PMID28455526
PMCPMC5430836
OpenAlexW2607878137

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.