Evidence map›Paper›PMID 28455506›Full record

ArticleScientific reports2017

Genome-wide fitness analyses of the foodborne pathogen Campylobacter jejuni in in vitro and in vivo models.

Stefan P de Vries, Srishti Gupta, Abiyad Baig, Elli Wright, Amy Wedley, Annette Nygaard Jensen, Lizeth LaCharme Lora, Suzanne Humphrey, Henrik Skovgård, Kareen Macleod and 12 more

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Article
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  4. UnravelingmSystems · 2025
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  8. Transcriptome Analysis ofPathogens (Basel, Switzerland) · 2023
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  9. Article
  10. Molecular Targets inBiomolecules · 2023
    Review
  11. Review
  12. Article
  13. Article
  14. Transient internalization ofMicrobiology (Reading, England) · 2022
    Article
  15. Detecting Glucose Fluctuations in theACS chemical biology · 2021
    Article
  16. Review
  17. Article
  18. Article
  19. Population Biology and Comparative Genomics of Campylobacter Species.Current topics in microbiology and immunology · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Stefan P de VriesDepartment of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom.ORCID http://orcid.org/0000-0002-0823-208X
Srishti GuptaDepartment of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom.
Abiyad BaigDepartment of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom.
Elli WrightDepartment of Infection Biology, Institute of Infection and Global Health, University of Liverpool, Leahurst Campus, Neston, United Kingdom.
Amy WedleyDepartment of Infection Biology, Institute of Infection and Global Health, University of Liverpool, Leahurst Campus, Neston, United Kingdom.
Annette Nygaard JensenTechnical University of Denmark, National Food Institute, Copenhagen, Denmark.
Lizeth LaCharme LoraDepartment of Infection Biology, Institute of Infection and Global Health, University of Liverpool, Leahurst Campus, Neston, United Kingdom.
Suzanne HumphreyDepartment of Infection Biology, Institute of Infection and Global Health, University of Liverpool, Leahurst Campus, Neston, United Kingdom.
Henrik SkovgårdDepartment of Agroecology, University of Aarhus, Slagelse, Denmark.
Kareen MacleodUniversity of Glasgow, Veterinary School, Glasgow, United Kingdom.
Elsa PontDepartment of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom.
Dominika P WolanskaDepartment of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom.
Joanna L'HeureuxDepartment of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom.
Fredrick M MobegiDepartment of Paediatric Infectious Diseases, Radboud Institute for Molecular Life Sciences, Radboud University Medical Centre, Nijmegen, The Netherlands.ORCID http://orcid.org/0000-0003-0554-9919
David G E SmithHeriot-Watt University, School of Life Sciences, Edinburgh, Scotland, United Kingdom.
Paul EverestUniversity of Glasgow, Veterinary School, Glasgow, United Kingdom.
Aldert ZomerDepartment of Infectious Diseases and Immunology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, The Netherlands.
Nicola WilliamsDepartment of Epidemiology and Population Health, Institute of Infection and Global Health, University of Liverpool, Leahurst Campus, Neston, United Kingdom.
Paul WigleyDepartment of Infection Biology, Institute of Infection and Global Health, University of Liverpool, Leahurst Campus, Neston, United Kingdom.
Thomas HumphreySchool of Medicine, Institute of Life Sciences, Swansea University, Swansea, United Kingdom.
Duncan J MaskellDepartment of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom.
Andrew J GrantDepartment of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom. ajg60@cam.ac.uk.

Funding

Biotechnology and Biological Sciences Research CouncilWellcome Trust
6 · The paper itself

Abstract

Campylobacter is the most common cause of foodborne bacterial illness worldwide. Faecal contamination of meat, especially chicken, during processing represents a key route of transmission to humans. There is a lack of insight into the mechanisms driving C. jejuni growth and survival within hosts and the environment. Here, we report a detailed analysis of C. jejuni fitness across models reflecting stages in its life cycle. Transposon (Tn) gene-inactivation libraries were generated in three C. jejuni strains and the impact on fitness during chicken colonisation, survival in houseflies and under nutrient-rich and -poor conditions at 4 °C and infection of human gut epithelial cells was assessed by Tn-insertion site sequencing (Tn-seq). A total of 331 homologous gene clusters were essential for fitness during in vitro growth in three C. jejuni strains, revealing that a large part of its genome is dedicated to growth. We report novel C. jejuni factors essential throughout its life cycle. Importantly, we identified genes that fulfil important roles across multiple conditions. Our comprehensive screens showed which flagella elements are essential for growth and which are vital to the interaction with host organisms. Future efforts should focus on how to exploit this knowledge to effectively control infections caused by C. jejuni.

Indexed as

Genetic FitnessGenome, BacterialAnimalsCampylobacter InfectionsCampylobacter jejuniCell LineChickensCulture MediaEpithelial CellsGene Expression ProfilingHost-Pathogen InteractionsHousefliesHumansMicrobial ViabilityMutagenesis, InsertionalTemperatureCulture Media

Identifiers

PMID28455506
PMCPMC5430854

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.