Evidence map›Paper›PMID 28455411›Full record

ArticleJournal of cell science2017

The VPS34 PI3K negatively regulates RAB-5 during endosome maturation.

Fiona Law, Jung Hwa Seo, Ziqing Wang, Jennifer L DeLeon, Yousstina Bolis, Ashley Brown, Wei-Xing Zong, Guangwei Du, Christian E Rocheleau

Open access · bronzeAbstract read
In one paragraph

Article in Journal of cell science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. mBio · 2023
    Article
  7. Macropinocytosis inFrontiers in plant science · 2023
    Article
  8. Article
  9. Article
  10. Article
  11. Class III PI3K Biology.Current topics in microbiology and immunology · 2022
    Article
  12. Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Small but mighty: Atg8s and Rabs in membrane dynamics during autophagy.Biochimica et biophysica acta. Molecular cell research · 2021
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Fiona LawDivision of Endocrinology and Metabolism, Departments of Medicine, and Anatomy and Cell Biology, McGill University, and the Program in Metabolic Disorders and Complications, Centre for Translational Biology, Research Institute of the McGill University Health Centre, Montreal, Quebec, Canada H4A 3J1.
Jung Hwa SeoDivision of Endocrinology and Metabolism, Departments of Medicine, and Anatomy and Cell Biology, McGill University, and the Program in Metabolic Disorders and Complications, Centre for Translational Biology, Research Institute of the McGill University Health Centre, Montreal, Quebec, Canada H4A 3J1.
Ziqing WangDepartment of Integrative Biology and Pharmacology, University of Texas Health Science Center at Houston, Houston, TX 77030, USA.
Jennifer L DeLeonDepartment of Molecular Genetics and Microbiology, Stony Brook University, Stony Brook, NY 11794, USA.
Yousstina BolisDivision of Endocrinology and Metabolism, Departments of Medicine, and Anatomy and Cell Biology, McGill University, and the Program in Metabolic Disorders and Complications, Centre for Translational Biology, Research Institute of the McGill University Health Centre, Montreal, Quebec, Canada H4A 3J1.
Ashley BrownDivision of Endocrinology and Metabolism, Departments of Medicine, and Anatomy and Cell Biology, McGill University, and the Program in Metabolic Disorders and Complications, Centre for Translational Biology, Research Institute of the McGill University Health Centre, Montreal, Quebec, Canada H4A 3J1.
Wei-Xing ZongDepartment of Molecular Genetics and Microbiology, Stony Brook University, Stony Brook, NY 11794, USA.
Guangwei DuDepartment of Integrative Biology and Pharmacology, University of Texas Health Science Center at Houston, Houston, TX 77030, USA.
Christian E RocheleauDivision of Endocrinology and Metabolism, Departments of Medicine, and Anatomy and Cell Biology, McGill University, and the Program in Metabolic Disorders and Complications, Centre for Translational Biology, Research Institute of the McGill University Health Centre, Montreal, Quebec, Canada H4A 3J1 christian.rocheleau@mcgill.ca.ORCID http://orcid.org/0000-0001-6738-5636
McGill University Health Centre · CAThe University of Texas Health Science Center at Houston · USRutgers, The State University of New Jersey · USStony Brook University · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Phosphatidylinositol 3-kinases and AutophagyR01GM097355 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI ZONG, WEI-XING · 2012 to 2015
$1.5M
Phospholipase D2 regulation of vascular smooth muscle cell migrationR01HL119478 · NHLBI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI DU, GUANGWEI · 2014 to 2017
$1.5M
NHLBI NIH HHS R01 HL119478NIGMS NIH HHS R01 GM097355NIH HHS P40 OD010440
6 · The paper itself

Abstract

The GTPase Rab5 and phosphatidylinositol-3 phosphate [PI(3)P] coordinately regulate endosome trafficking. Rab5 recruits Vps34, the class III phosphoinositide 3-kinase (PI3K), to generate PI(3)P and recruit PI(3)P-binding proteins. Loss of Rab5 and loss of Vps34 have opposite effects on endosome size, suggesting that our understanding of how Rab5 and PI(3)P cooperate is incomplete. Here, we report a novel regulatory loop whereby

Indexed as

AnimalsAnimals, Genetically ModifiedCaenorhabditis elegansCaenorhabditis elegans ProteinsCell MembraneClass III Phosphatidylinositol 3-KinasesEndosomesFibroblastsGreen Fluorescent ProteinsGTPase-Activating ProteinsLiposomesMiceMice, KnockoutMutationPhenotypePlasmidsCaenorhabditis elegans ProteinsClass III Phosphatidylinositol 3-KinasesGreen Fluorescent ProteinsGTPase-Activating ProteinsLiposomesrab5 GTP-Binding ProteinsTBC-2 protein, C elegansCaenorhabditis elegansEndosomePhosphatidylinositide-3 phosphateRab GTPaseTBC-2Vps34

Identifiers

PMID28455411
PMCPMC5482978
OpenAlexW2609503782

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.