Evidence map›Paper›PMID 28453393›Full record

ArticleRNA biology2017

Cleavage and polyadenylation: Ending the message expands gene regulation.

Jonathan Neve, Radhika Patel, Zhiqiao Wang, Alastair Louey, André Martin Furger

Abstract read
In one paragraph

Article in RNA biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed.

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  20. Coupling of alternative splicing and alternative polyadenylation.Acta biochimica et biophysica Sinica · 2024
    Review

38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jonathan Nevea Department of Biochemistry , University of Oxford , Oxford , United Kingdom.
Radhika Patela Department of Biochemistry , University of Oxford , Oxford , United Kingdom.ORCID 0000-0002-6880-0149
Zhiqiao Wanga Department of Biochemistry , University of Oxford , Oxford , United Kingdom.ORCID 0000-0002-3453-3855
Alastair Loueya Department of Biochemistry , University of Oxford , Oxford , United Kingdom.ORCID 0000-0003-4201-4729
André Martin Furgera Department of Biochemistry , University of Oxford , Oxford , United Kingdom.ORCID 0000-0002-1161-2841

Funding

Biotechnology and Biological Sciences Research Council BB/N001184/1
6 · The paper itself

Abstract

Cleavage and polyadenylation (pA) is a fundamental step that is required for the maturation of primary protein encoding transcripts into functional mRNAs that can be exported from the nucleus and translated in the cytoplasm. 3'end processing is dependent on the assembly of a multiprotein processing complex on the pA signals that reside in the pre-mRNAs. Most eukaryotic genes have multiple pA signals, resulting in alternative cleavage and polyadenylation (APA), a widespread phenomenon that is important to establish cell state and cell type specific transcriptomes. Here, we review how pA sites are recognized and comprehensively summarize how APA is regulated and creates mRNA isoform profiles that are characteristic for cell types, tissues, cellular states and disease.

Indexed as

AnimalsHumansModels, BiologicalPolyadenylationRNA CapsRNA CleavageRNA, MessengerRNA SplicingRNA CapsRNA, Messenger3′end processingalternative cleavage and polyadenylationgene expression

Identifiers

PMID28453393
PMCPMC5546720

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.