Evidence map›Paper›PMID 28452019›Full record

Article3 Biotech2017

Structure and function of seed storage proteins in faba bean (Vicia faba L.).

Yujiao Liu, Xuexia Wu, Wanwei Hou, Ping Li, Weichao Sha, Yingying Tian

Open access · bronzeAbstract read
In one paragraph

Article in 3 Biotech, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
5.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Antibacterial peptide fractions from chia seeds (Journal of food science and technology · 2022
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Identification and Quantification of Major Faba Bean Seed Proteins.Journal of agricultural and food chemistry · 2020
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yujiao LiuState Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Qinghai Academy of Agricultural and Forestry Science, Xining, Qinghai, 810016, People's Republic of China. 13997058356@163.com.
Xuexia WuState Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Qinghai Academy of Agricultural and Forestry Science, Xining, Qinghai, 810016, People's Republic of China.
Wanwei HouState Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Qinghai Academy of Agricultural and Forestry Science, Xining, Qinghai, 810016, People's Republic of China.
Ping LiState Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Qinghai Academy of Agricultural and Forestry Science, Xining, Qinghai, 810016, People's Republic of China.
Weichao ShaState Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Qinghai Academy of Agricultural and Forestry Science, Xining, Qinghai, 810016, People's Republic of China.
Yingying TianState Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Qinghai Academy of Agricultural and Forestry Science, Xining, Qinghai, 810016, People's Republic of China.
Qinghai University · CNState Key Laboratory of Plateau Ecology and Agriculture

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The protein subunit is the most important basic unit of protein, and its study can unravel the structure and function of seed storage proteins in faba bean. In this study, we identified six specific protein subunits in Faba bean (cv. Qinghai 13) combining liquid chromatography (LC), liquid chromatography-electronic spray ionization mass (LC-ESI-MS/MS) and bio-information technology. The results suggested a diversity of seed storage proteins in faba bean, and a total of 16 proteins (four GroEL molecular chaperones and 12 plant-specific proteins) were identified from 97-, 96-, 64-, 47-, 42-, and 38-kD-specific protein subunits in faba bean based on the peptide sequence. We also analyzed the composition and abundance of the amino acids, the physicochemical characteristics, secondary structure, three-dimensional structure, transmembrane domain, and possible subcellular localization of these identified proteins in faba bean seed, and finally predicted function and structure. The three-dimensional structures were generated based on homologous modeling, and the protein function was analyzed based on the annotation from the non-redundant protein database (NR database, NCBI) and function analysis of optimal modeling. The objective of this study was to identify the seed storage proteins in faba bean and confirm the structure and function of these proteins. Our results can be useful for the study of protein nutrition and achieve breeding goals for optimal protein quality in faba bean.

Indexed as

BioinformaticsFaba beanFunctionLC–ESI–MS/MSProtein subunitStructure

Identifiers

PMID28452019
PMCPMC5428115
OpenAlexW2607962875

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.