Evidence map›Paper›PMID 2845140›Full record

ArticleJournal of virology1988

Interactions between coronavirus nucleocapsid protein and viral RNAs: implications for viral transcription.

R S Baric, G W Nelson, J O Fleming, R J Deans, J G Keck, N Casteel, S A Stohlman

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 1988. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 117 papers.

0numbers the graph read from it
0cells of the map it votes in
117citing papers in PubMed
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

117 citing papers in PubMed, 187 citations in OpenAlex.

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  15. Journal of biomolecular structure & dynamics · 2021
    Article
  16. Article
  17. Review
  18. Review
  19. Article
  20. The molecular virology of coronaviruses.The Journal of biological chemistry · 2020
    Review

57 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

R S BaricDepartment of Parasitology and Laboratory Practice, University of North Carolina School of Public Health, Chapel Hill 27514.
G W Nelson
J O Fleming
R J Deans
J G Keck
N Casteel
S A Stohlman
University of North Carolina at Chapel Hill · US

Funding

MURINE CORONAVIRUS RNA SYNTHESISR01AI019244 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LAI, MICHAEL M.C. · 1985 to 2004
$1.6M
ROLE OF AUTOREACTIVE T CELLS IN MURINE AIDSR01AI031386 · NIAID · LOVELACE RESPIRATORY RESEARCH INSTITUTE · PI SOPORI, MOHAN L. · 1991 to 1993
–
NIAID NIH HHS AI 19244NIAID NIH HHS AI 31386NINDS NIH HHS NS 18146
6 · The paper itself

Abstract

The interaction of the mouse hepatitis virus (MHV) nucleocapsid protein (N) and viral RNA was examined. Monoclonal antibody specific for N protein coimmunoprecipitated MHV genomic RNA as well as all six MHV subgenomic mRNAs found in MHV-infected cells. In contrast, monoclonal antibodies to the MHV E2 or E1 envelope glycoproteins, an anti-I-A monoclonal antibody, and serum samples from lupus patients did not immunoprecipitate the MHV mRNAs. Moreover, the anti-N monoclonal antibody did not coimmunoprecipitate vesicular stomatitis virus RNA or host cell RNA under conditions which immunoprecipitated all MHV RNAs. These data suggest a specific interaction between the N protein and the virus-specific mRNAs. Both the membrane-bound and cytosolic small MHV leader-specific RNAs of greater than 65 nucleotides long were immunoprecipitated only by anti-N monoclonal antibody. These data suggest that an N binding site is present within the leader RNA sequences at a site at least 65 nucleotides from the 5' end of genomic RNA and all six subgenomic mRNAs. The larger leader-containing RNAs originating from mRNA 1 and mRNA 6, as well as the MHV negative-stranded RNA, were also immunoprecipitated by the anti-N monoclonal antibody. These data indicate that the MHV N protein is associated with MHV-specific RNAs and RNA intermediates and may play an important functional role during MHV transcription and replication.

Indexed as

Transcription, GeneticAntibodies, MonoclonalBase SequenceBinding SitesCapsidCarrier ProteinsMurine hepatitis virusPrecipitin TestsRNA-Binding ProteinsRNA, ViralVesicular stomatitis Indiana virusViral Core ProteinsVirus CultivationAntibodies, MonoclonalCarrier ProteinsRNA-Binding ProteinsRNA, ViralViral Core Proteins

Identifiers

PMID2845140
PMCPMC253862
OpenAlexW1670333811

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.