Evidence map›Paper›PMID 28448552›Full record

ArticlePloS one2017

Transcriptomic analysis of the hepatic response to stress in the red cusk-eel (Genypterus chilensis): Insights into lipid metabolism, oxidative stress and liver steatosis.

Sebastian Naour, Brisa M Espinoza, Jorge E Aedo, Rodrigo Zuloaga, Jonathan Maldonado, Macarena Bastias-Molina, Herman Silva, Claudio Meneses, Cristian Gallardo-Escarate, Alfredo Molina and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Sebastian NaourUniversidad Andres Bello, Laboratorio de Biotecnología Molecular, Facultad Ciencias Biológicas, Santiago, Chile.
Brisa M EspinozaUniversidad Andres Bello, Laboratorio de Biotecnología Molecular, Facultad Ciencias Biológicas, Santiago, Chile.
Jorge E AedoUniversidad Andres Bello, Laboratorio de Biotecnología Molecular, Facultad Ciencias Biológicas, Santiago, Chile.
Rodrigo ZuloagaUniversidad Andres Bello, Laboratorio de Biotecnología Molecular, Facultad Ciencias Biológicas, Santiago, Chile.
Jonathan MaldonadoUniversidad de Chile, Facultad de Ciencias Agronómicas, Departamento de Producción Agrícola, Laboratorio de Genómica Funcional & Bioinformática, Av. Santa Rosa, La Pintana, Santiago, Chile.
Macarena Bastias-MolinaUniversidad Andres Bello, Centro de Biotecnología Vegetal, FONDAP Center for Genome Regulation, Facultad de Ciencias Biológicas, Santiago, Chile.
Herman SilvaUniversidad de Chile, Facultad de Ciencias Agronómicas, Departamento de Producción Agrícola, Laboratorio de Genómica Funcional & Bioinformática, Av. Santa Rosa, La Pintana, Santiago, Chile.
Claudio MenesesUniversidad Andres Bello, Centro de Biotecnología Vegetal, FONDAP Center for Genome Regulation, Facultad de Ciencias Biológicas, Santiago, Chile.
Cristian Gallardo-EscarateInterdisciplinary Center for Aquaculture Research (INCAR), Concepción, Chile.
Alfredo MolinaUniversidad Andres Bello, Laboratorio de Biotecnología Molecular, Facultad Ciencias Biológicas, Santiago, Chile.
Juan Antonio ValdésUniversidad Andres Bello, Laboratorio de Biotecnología Molecular, Facultad Ciencias Biológicas, Santiago, Chile.ORCID http://orcid.org/0000-0002-0615-820X
Universidad Andrés Bello · CLUniversity of Chile · CLUniversity of Concepción · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Teleosts exhibit a broad divergence in their adaptive response to stress, depending on the magnitude, duration, and frequency of stressors and the species receiving the stimulus. We have previously reported that the red cusk-eel (Genypterus chilensis), an important marine farmed fish, shows a physiological response to stress that results in increased skeletal muscle atrophy mediated by over-expression of components of the ubiquitin proteasome and autophagy-lysosomal systems. To better understand the systemic effects of stress on the red cusk-eel metabolism, the present study assessed the transcriptomic hepatic response to repetitive handling-stress. Using high-throughput RNA-seq, 259 up-regulated transcripts were found, mostly associated with angiogenesis, gluconeogenesis, and triacylglyceride catabolism. Conversely, 293 transcripts were down-regulated, associated to cholesterol biosynthesis, PPARα signaling, fatty acid biosynthesis, and glycolysis. This gene signature was concordant with hepatic metabolite levels and hepatic oxidative damage. Moreover, the increased plasmatic levels of AST (aspartate aminotransferase), ALT (alanine aminotransferase) and AP (alkaline phosphatase), as well as liver histology suggest stress-induced liver steatosis. This study offers an integrative molecular and biochemical analysis of the hepatic response to handling-stress, and reveals unknown aspects of lipid metabolism in a non-model teleost.

Indexed as

Gene Expression ProfilingAnimalsFishesGene OntologyLipid MetabolismLiverNon-alcoholic Fatty Liver DiseaseOxidative StressSequence Analysis, RNA

Identifiers

PMID28448552
PMCPMC5407771
OpenAlexW2609549211

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.