Evidence map›Paper›PMID 28448128›Full record

ArticleJournal of the American Chemical Society2017

Total Chemical Synthesis and Folding of All-l and All-d Variants of Oncogenic KRas(G12V).

Adam M Levinson, John H McGee, Andrew G Roberts, Gardner S Creech, Ting Wang, Michael T Peterson, Ronald C Hendrickson, Gregory L Verdine, Samuel J Danishefsky

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 55 citations in OpenAlex.

  1. Review
  2. Backbone Protecting Groups for Enhanced Peptide and Protein Synthesis.Angewandte Chemie (International ed. in English) · 2025
    Review
  3. Article
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  7. Review
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  14. Novel protein science enabled by total chemical synthesis.Protein science : a publication of the Protein Society · 2019
    Review
  15. Xenoprotein engineering via synthetic libraries.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Adam M LevinsonTri-Institutional PhD Program in Chemical Biology, Weill Cornell Medical College , New York, New York 10065, United States.
John H McGeeDepartments of Molecular and Cellular Biology, Stem Cell and Regenerative Biology, and Chemistry and Chemical Biology, Harvard University and Harvard Medical School , Cambridge, Massachusetts 02138, United States.
Gardner S Creech
Michael T Peterson
Ronald C Hendrickson
Gregory L VerdineDepartments of Molecular and Cellular Biology, Stem Cell and Regenerative Biology, and Chemistry and Chemical Biology, Harvard University and Harvard Medical School , Cambridge, Massachusetts 02138, United States.
Samuel J DanishefskyDepartment of Chemistry, Columbia University , Havemeyer Hall, 3000 Broadway, New York, New York 10027, United States.ORCID 0000-0002-7010-8434
Harvard University · USColumbia University · USCornell University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Nicholas D Socci · 1985 to 2026
$347.4M
CANCER PHARMACOLOGYT32CA062948 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI LORRAINE J GUDAS · 1994 to 2026
$12.1M
Synthesis Directed Toward Therapeutic AgentsR01GM102872 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI TAN, DEREK S · 2012 to 2015
$2.3M
New Synthetic Reactions to Reach Bioactive ProteinsR01GM109760 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI LUO, MINKUI · 2014 to 2017
$1.7M
LTQ-ORBITRAP VELOS Tandem Mass SpectrometerS10OD010598 · OD · SLOAN-KETTERING INST CAN RESEARCH · PI HENDRICKSON, RONALD CHARLES · 2012 to 2012
$460k
Development of D-Peptide Inhibitors of Oncogenic KRAS MutantsR21CA187498 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI LI, YUEMING · 2015 to 2016
$421k
Solid-Phase Fragment Coupling Synthesis of Granulocyte Colony-Stimulating FactorF32CA186398 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI ROBERTS, ANDREW GEORGE · 2014 to 2016
$157k
NCL with induced a-Helices: de Novo Chemical Synthesis of the ATAD2 bromodomainF32GM101746 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI CREECH, GARDNER SILAS · 2012 to 2014
$104k
NCI NIH HHS F32 CA186398NCI NIH HHS P30 CA008748NCI NIH HHS R21 CA187498NCI NIH HHS T32 CA062948NIGMS NIH HHS F32 GM101746NIGMS NIH HHS R01 GM102872NIGMS NIH HHS R01 GM109760NIH HHS S10 OD010598
6 · The paper itself

Abstract

The Ras proteins are essential GTPases involved in the regulation of cell proliferation and survival. Mutated oncogenic forms of Ras alter effector binding and innate GTPase activity, leading to deregulation of downstream signal transduction. Mutated forms of Ras are involved in approximately 30% of human cancers. Despite decades of effort to develop direct Ras inhibitors, Ras has long been considered "undruggable" due to its high affinity for GTP and its lack of hydrophobic binding pockets. Herein, we report a total chemical synthesis of all-l- and all-d-amino acid biotinylated variants of oncogenic mutant KRas(G12V). The protein is synthesized using Fmoc-based solid-phase peptide synthesis and assembled using combined native chemical ligation and isonitrile-mediated activation strategies. We demonstrate that both KRas(G12V) enantiomers can successfully fold and bind nucleotide substrates and binding partners with observable enantiodiscrimination. By demonstrating the functional competency of a mirror-image form of KRas bound to its corresponding enantiomeric nucleotide triphosphate, this study sets the stage for further biochemical studies with this material. In particular, this protein will enable mirror-image yeast surface display experiments to identify all-d peptide ligands for oncogenic KRas, providing a useful tool in the search for new therapeutics against this challenging disease target.

Indexed as

Amino Acid SequenceGenetic VariationHumansProtein FoldingProto-Oncogene Proteins p21(ras)KRAS protein, humanProto-Oncogene Proteins p21(ras)

Identifiers

PMID28448128
PMCPMC5606205
OpenAlexW2608182430

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.