ArticleNature methods2017
Systems biology guided by XCMS Online metabolomics.
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In one paragraph
Article in Nature methods, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.
0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
98 citing papers in PubMed.
- Integrative metabolomics and transcriptomics signatures of clinical tolerance to Plasmodium vivax reveal activation of innate cell immunity and T cell signaling.Redox biology · 2018Trial
- Characterizing the metabolomes of microglia, astrocytes and neurons in ageing and Alzheimer's brains.Nature cell biology · 2026Article
- From hidden allies to precision symbionts: unleashing endophytes for sustainable agroecosystems.World journal of microbiology & biotechnology · 2026Review
- A combination of automatic untargeted metabolic profiling analysis with targeted metabolomics to enhance geographical discrimination ofFood chemistry: X · 2026Article
- mzLearn as a data-driven LC/MS signal detection algorithm that enables pre-trained generative models for untargeted metabolomics.Communications chemistry · 2025Article
- Metabolites are not genes - avoiding the misuse of pathway analysis in metabolomics.Nature metabolism · 2025Article
- Article
- Review
- Use of ultra-high performance liquid chromatography-high-resolution mass spectroscopy to profile the metabolites from the serum of patients with breast cancer.Oncology letters · 2024Article
- Data processing solutions to render metabolomics more quantitative: case studies in food and clinical metabolomics using Metabox 2.0.GigaScience · 2024Article
- Multiplatform untargeted metabolomics.Magnetic resonance in chemistry : MRC · 2023Review
- Integrated Analysis of the Effects of Cecal Microbiota and Serum Metabolome on Market Weights of Chinese Native Chickens.Animals : an open access journal from MDPI · 2023Article
- Paired microbiome and metabolome analyses associate bile acid changes with colorectal cancer progression.Cell reports · 2023Article
- Bioactive Compounds with Pesticide Activities Derived from Aged Cultures of Green Microalgae.Biology · 2023Article
- Clonostachys rosea 'omics profiling: identification of putative metabolite-gene associations mediating its in vitro antagonism against Fusarium graminearum.BMC genomics · 2023Article
- Fecal Metabolomics Reveals the Foraging Strategies of Giant Pandas for Different Parts of Bamboo.Animals : an open access journal from MDPI · 2023Article
- A mass spectrum-oriented computational method for ion mobility-resolved untargeted metabolomics.Nature communications · 2023Article
- Discovering New Natural Products Using Metabolomics-Based Approaches.Advances in experimental medicine and biology · 2023Article
- Article
- Function discovery of a non-ribosomal peptide synthetase-like encoding gene in the nematode-trapping fungusFrontiers in microbiology · 2023Article
38 more citing papers are in PubMed but not listed here.
Corrections and comments
- Comment on
Authors and funding
23 authors.
Tao HuanScripps Center for Metabolomics, The Scripps Research Institute, La Jolla, California, USA.ORCID 0000-0001-6295-2435
Erica M ForsbergScripps Center for Metabolomics, The Scripps Research Institute, La Jolla, California, USA.
Duane RinehartScripps Center for Metabolomics, The Scripps Research Institute, La Jolla, California, USA.
Caroline H JohnsonScripps Center for Metabolomics, The Scripps Research Institute, La Jolla, California, USA.
Julijana IvanisevicMetabolomics Platform, Faculty of Biology and Medicine, University of Lausanne, Lausanne, Switzerland.
H Paul BentonScripps Center for Metabolomics, The Scripps Research Institute, La Jolla, California, USA.
Mingliang FangScripps Center for Metabolomics, The Scripps Research Institute, La Jolla, California, USA.
Aries AispornaScripps Center for Metabolomics, The Scripps Research Institute, La Jolla, California, USA.
Brian HilmersScripps Center for Metabolomics, The Scripps Research Institute, La Jolla, California, USA.
Farris L PooleDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA.
Michael P ThorgersenDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA.
Michael W W AdamsDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA.
Gregory KrantzDepartment of Microbiology and Immunology and Center for Biofilm Engineering, Montana State University, Montana State University, Bozeman, Montana, USA.
Matthew W FieldsDepartment of Microbiology and Immunology and Center for Biofilm Engineering, Montana State University, Montana State University, Bozeman, Montana, USA.ORCID 0000-0001-9053-1849
Paul D RobbinsDepartments of Metabolism and Aging, The Scripps Research Institute-Florida, Jupiter, Florida, USA.
Laura J NiedernhoferDepartments of Metabolism and Aging, The Scripps Research Institute-Florida, Jupiter, Florida, USA.
Trey IdekerDepartment of Medicine, University of California San Diego, La Jolla, California, USA.
Erica L MajumderDepartment of Biochemistry, University of Missouri, Columbia, Missouri, USA.
Judy D WallDepartment of Biochemistry, University of Missouri, Columbia, Missouri, USA.ORCID 0000-0002-9152-5544
Nicholas J W RattrayYale School of Public Health, Yale University, New Haven, Connecticut, USA.
Royston GoodacreManchester Institute of Biotechnology, School of Chemistry, The University of Manchester, Manchester, UK.ORCID 0000-0003-2230-645X
Luke L LairsonDepartment of Chemistry, The Scripps Research Institute, La Jolla, California, USA.
Gary SiuzdakScripps Center for Metabolomics, The Scripps Research Institute, La Jolla, California, USA.
Funding
Pharmacokinetics and Drug-Drug InteractionsP01DA028555 · NIDA · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI ALNOUTI, YAZEN · 2010 to 2019
$16.8MPROTEOMICSP01AG043376 · NIA · UNIVERSITY OF MINNESOTA · PI ROBBINS, PAUL D. · 2013 to 2019
$11.2MBiotechnology and Biological Sciences Research Council BB/M017702/1NIA NIH HHS P01 AG043376NIDA NIH HHS P01 DA028555
Abstract
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.