Evidence map›Paper›PMID 28444387›Full record

ArticleMolecular biology and evolution2017

Meiotic Genes Are Enriched in Regions of Reduced Archaic Ancestry.

B Jégou, S Sankararaman, A D Rolland, D Reich, F Chalmel

Abstract read
In one paragraph

Article in Molecular biology and evolution, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

B JégouInserm U1085-IRSET, Université de Rennes 1, Rennes, France.
S SankararamanDepartment of Computer Science, UCLA, Los Angeles, CA.
A D RollandInserm U1085-IRSET, Université de Rennes 1, Rennes, France.
D ReichDepartment of Genetics, Harvard Medical School, Boston, MA.
F ChalmelInserm U1085-IRSET, Université de Rennes 1, Rennes, France.

Funding

Population mixture in evolutionary and medical geneticsR01GM100233 · NIGMS · HARVARD MEDICAL SCHOOL · PI PATTERSON, NICK J, REICH, DAVID E · 2012 to 2019
$2.7M
Statistical methods to infer structure and impact of ancient admixtureR00GM111744 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SANKARARAMAN, SRIRAM · 2016 to 2017
$498k
Howard Hughes Medical InstituteNIGMS NIH HHS R00 GM111744NIGMS NIH HHS R01 GM100233
6 · The paper itself

Abstract

About 1-6% of the genetic ancestry of modern humans today originates from admixture with archaic humans. It has recently been shown that autosomal genomic regions with a reduced proportion of Neanderthal and Denisovan ancestries (NA and DA) are significantly enriched in genes that are more expressed in testis than in other tissues. To determine whether a cellular segregation pattern would exist, we combined maps of archaic introgression with a cross-analysis of three transcriptomic datasets deciphering the transcriptional landscape of human gonadal cell types. We reveal that the regions deficient in both NA and DA contain a significant enrichment of genes transcribed in meiotic germ cells. The interbreeding of anatomically modern humans with archaic humans may have introduced archaic-derived alleles that contributed to genetic incompatibilities affecting meiosis that were subsequently purged by natural selection.

Indexed as

AllelesAnimalsDatabases, GeneticEvolution, MolecularGene Expression Regulation, DevelopmentalGenome, HumanGenomicsHominidaeHumansMaleMeiosisNeanderthalsSelection, GeneticTestisarchaic hominin admixturegenetic incompatibilitiesgerm cellsmeiosistestis

Identifiers

PMID28444387
PMCPMC5850719

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.