Evidence map›Paper›PMID 28444146›Full record

ReviewBiology of reproduction2017

Nonsense in the testis: multiple roles for nonsense-mediated decay revealed in male reproduction.

Clinton C MacDonald, Petar N Grozdanov

Open access · bronzeAbstract readReview
In one paragraph

Review in Biology of reproduction, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Tex13a Optimizes Sperm MotilityFrontiers in cell and developmental biology · 2021
    Article
  9. Review
  10. Review
  11. Article
  12. Review
  13. ALKBH5-dependent m6A demethylation controls splicing and stability of long 3'-UTR mRNAs in male germ cells.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Clinton C MacDonaldDepartment of Cell Biology and Biochemistry, Texas Tech University Health Sciences Center, Lubbock, Texas.
Petar N GrozdanovDepartment of Cell Biology and Biochemistry, Texas Tech University Health Sciences Center, Lubbock, Texas.
Texas Tech University · US

Funding

MRNA PROCESSING IN REPRODUCTION &FERTILIZATIONR01HD037109 · NICHD · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI MACDONALD, CLINTON C · 1999 to 2015
$3.3M
NICHD NIH HHS R01 HD037109
6 · The paper itself

Abstract

Nonsense-mediated mRNA decay, or NMD, is a quality control mechanism that identifies cytoplasmic mRNAs containing translational termination (stop) codons in specific contexts-either premature termination codons or unusually long 3΄ untranslated regions (UTRs)-and targets them for degradation. In recent studies, researchers in different labs have knocked out important genes involved in NMD, the up-frameshift genes Upf2 and Upf3a, and one component of chromatoid bodies, the Tudor domain-containing protein Tdrd6, and examined the consequences for spermatogenesis. Disruption of Upf2 during early stages of spermatogenesis resulted in disappearance of nearly all spermatogenic cells through loss of NMD. However, disruption of Upf2 during postmeiotic stages resulted in decreased long 3΄ UTR-mediated NMD but no interruption of exon junction-associated NMD. This difference in NMD targeting is possibly due to increased expression of Upf3a in postmeiotic germ cells that antagonizes the functions of Upf3b and somehow favors long 3΄ UTR-mediated NMD. Tying these all together, loss of Tdrd6, a structural component of the germ cell-specific cytoplasmic structures called chromatoid bodies, also resulted in loss of long 3΄ UTR-mediated NMD by interfering with UPF1/UPF2 interactions, delocalizing UPF1, and destroying chromatoid body integrity. These results suggest that chromatoid bodies play a specialized role in modulating the NMD machinery in postmeiotic spermatids.

Indexed as

3' Untranslated RegionsAnimalsCodon, NonsenseHumansMaleNonsense Mediated mRNA DecaySpermatogenesisTestis3' Untranslated RegionsCodon, Nonsense3΄ untranslated regionchromatoid bodymRNA processingnonsense-mediated decaypremature stop codonSertoli cellspermatogenesistestis

Identifiers

PMID28444146
PMCPMC5803779
OpenAlexW2607342605

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.