Evidence map›Paper›PMID 28442766›Full record

ArticleScientific reports2017

Nanoscale Membrane Domain Formation Driven by Cholesterol.

Matti Javanainen, Hector Martinez-Seara, Ilpo Vattulainen

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Article
  2. Review
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  5. Review
  6. Review
  7. Article
  8. Article
  9. Closed-loop fluid-fluid immiscibility in binary lipid-sterol membranes.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  10. CHARMM-GUIJournal of chemical theory and computation · 2023
    Review
  11. Recombination betweenAnalytical chemistry · 2022
    Article
  12. Article
  13. The Two Faces of the Liquid Ordered Phase.The journal of physical chemistry letters · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Matti JavanainenLaboratory of Physics, Tampere University of Technology, Tampere, Finland.ORCID http://orcid.org/0000-0003-4858-364X
Hector Martinez-SearaLaboratory of Physics, Tampere University of Technology, Tampere, Finland. hseara@gmail.com.ORCID http://orcid.org/0000-0001-9716-1713
Ilpo VattulainenLaboratory of Physics, Tampere University of Technology, Tampere, Finland. ilpo.vattulainen@helsinki.fi.ORCID http://orcid.org/0000-0001-7408-3214

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biological membranes generate specific functions through compartmentalized regions such as cholesterol-enriched membrane nanodomains that host selected proteins. Despite the biological significance of nanodomains, details on their structure remain elusive. They cannot be observed via microscopic experimental techniques due to their small size, yet there is also a lack of atomistic simulation models able to describe spontaneous nanodomain formation in sufficiently simple but biologically relevant complex membranes. Here we use atomistic simulations to consider a binary mixture of saturated dipalmitoylphosphatidylcholine and cholesterol - the "minimal standard" for nanodomain formation. The simulations reveal how cholesterol drives the formation of fluid cholesterol-rich nanodomains hosting hexagonally packed cholesterol-poor lipid nanoclusters, both of which show registration between the membrane leaflets. The complex nanodomain substructure forms when cholesterol positions itself in the domain boundary region. Here cholesterol can also readily flip-flop across the membrane. Most importantly, replacing cholesterol with a sterol characterized by a less asymmetric ring region impairs the emergence of nanodomains. The model considered explains a plethora of controversial experimental results and provides an excellent basis for further computational studies on nanodomains. Furthermore, the results highlight the role of cholesterol as a key player in the modulation of nanodomains for membrane protein function.

Indexed as

1,2-DipalmitoylphosphatidylcholineCholesterolMembrane MicrodomainsModels, BiologicalModels, Molecular1,2-DipalmitoylphosphatidylcholineCholesterol

Identifiers

PMID28442766
PMCPMC5430823

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.